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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183178821
OLPH01000579
117741
Bacteroidota
TAG
Leu
>WENV183179496
OLPH01005083
398829
Bacteroidota
CCT
Arg
>WENV183178794
OLPH01000535
175838
Bacteroidota
GTT
Asn
>WENV183178534
OLPH01000161
404226
Bacteroidota
CCT
Arg
>WENV183178402
OLPH01000068
175904
Bacteroidota
CGG
Pro
>WENV183178662
OLPH01000317
289031
Bacteroidota
CAT
Met
>WENV183178288
OLPH01000006
289031
Bacteroidota
CAT
Met
>WENV183178755
OLPH01000449
280557
Bacteroidota
CAT
Met
>WENV183179344
OLPH01002983
20206
Bacteroidota
GGA
Ser
>WENV183178671
OLPH01000330
483416
Bacteroidota
CTG
Gln
>WENV183178577
OLPH01000213
483416
Bacteroidota
CTG
Gln
>WENV183178533
OLPH01000161
398871
Bacteroidota
TTC
Glu
>WENV183179108
OLPH01001468
322882
Bacteroidota
GCC
Gly
>WENV183179151
OLPH01001655
175903
Bacteroidota
GTG
His
>WENV183179807
OLPH01017866
291612
Bacteroidota
>WENV183179615
OLPH01007781
118089
Bacteroidota
TAG
Leu
>WENV183178403
OLPH01000068
280530
Bacteroidota
CCA
Trp
>WENV183178811
OLPH01000550
178907
Bacteroidota
TCT
Arg
>WENV183178375
OLPH01000057
405877
Bacteroidota
GGT
Thr
>WENV183178290
OLPH01000007
182267
Bacteroidota
GTT
Asn
>WENV183178602
OLPH01000246
20449
Bacteroidota
GGA
Ser
>WENV183178405
OLPH01000068
20449
Bacteroidota
GGA
Ser
>WENV183178630
OLPH01000281
21127
Bacteroidota
GGA
Ser
>WENV183178869
OLPH01000706
56072
Bacteroidota
TAA
Leu
>WENV183179149
OLPH01001650
57807
Bacteroidota
TGA
Ser
>WENV183179033
OLPH01001137
57807
Bacteroidota
TGA
Ser
>WENV183178457
OLPH01000108
175886
Bacteroidota
GGC
Ala
>WENV183178635
OLPH01000287
175902
Bacteroidota
GGC
Ala
>WENV183178299
OLPH01000010
179697
Bacteroidota
TGT
Thr
>WENV183179884
OLPH01024802
480404
Bacteroidota
TTG
Gln
>WENV183179517
OLPH01005502
280451
Bacteroidota
CGT
Thr
>WENV183178909
OLPH01000794
418894
Bacteroidota
TTC
Glu
>WENV183178920
OLPH01000829
99847
Bacteroidota
GTA
Tyr
>WENV183179476
OLPH01004618
399200
Bacteroidota
CAT
Met
>WENV183179112
OLPH01001497
399200
Bacteroidota
CAT
Met
>WENV183178304
OLPH01000013
399200
Bacteroidota
CAT
Met
>WENV183180166
OLPH01076328
186874
Bacteroidota
CAT
Met
>WENV183179467
OLPH01004490
488746
Bacteroidota
CTG
Gln
>WENV183180131
OLPH01065672
399026
Bacteroidota
CCT
Arg
>WENV183180012
OLPH01043378
186108
Bacteroidota
GTT
Asn
>WENV183179818
OLPH01018569
186108
Bacteroidota
GTT
Asn
>WENV183178973
OLPH01000972
175844
Bacteroidota
GGC
Ala
>WENV183180169
OLPH01077461
280532
Bacteroidota
>WENV183178788
OLPH01000524
73011
Bacteroidota
CAA
Leu
>WENV183178886
OLPH01000750
280515
Bacteroidota
CCA
Trp
>WENV183179358
OLPH01003144
183889
Bacteroidota
GGC
Ala
>WENV183178472
OLPH01000124
480318
Bacteroidota
CTG
Gln
>WENV183178715
OLPH01000394
158068
Bacteroidota
GGG
Pro
>WENV183178850
OLPH01000651
398828
Bacteroidota
CCG
Arg
>WENV183178837
OLPH01000603
398828
Bacteroidota
CCG
Arg
>WENV183178400
OLPH01000068
74084
Bacteroidota
CAG
Leu
>WENV183179560
OLPH01006470
159415
Bacteroidota
TAC
Val
>WENV183178313
OLPH01000015
480325
Bacteroidota
CTG
Gln
>WENV183178546
OLPH01000179
176192
Bacteroidota
TCT
Arg
>WENV183179527
OLPH01005697
280446
Bacteroidota
TTT
Lys
>WENV183178843
OLPH01000626
280446
Bacteroidota
TTT
Lys
>WENV183178832
OLPH01000595
280446
Bacteroidota
TTT
Lys
>WENV183178615
OLPH01000261
280446
Bacteroidota
TTT
Lys
>WENV183178999
OLPH01001029
484496
Bacteroidota
TTG
Gln
>WENV183178636
OLPH01000290
484496
Bacteroidota
TTG
Gln
>WENV183178579
OLPH01000224
285750
Bacteroidota
CCC
Gly
>WENV183178521
OLPH01000154
285750
Bacteroidota
CCC
Gly
>WENV183179749
OLPH01014239
188555
Bacteroidota
CAT
Met
>WENV183179565
OLPH01006506
398836
Bacteroidota
GCA
Cys
>WENV183179143
OLPH01001641
398836
Bacteroidota
GCA
Cys
>WENV183179031
OLPH01001136
398836
Bacteroidota
GCA
Cys
>WENV183178991
OLPH01001014
398836
Bacteroidota
GCA
Cys
>WENV183178748
OLPH01000436
398836
Bacteroidota
GCA
Cys
>WENV183178604
OLPH01000248
398836
Bacteroidota
GCA
Cys
>WENV183179737
OLPH01013480
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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