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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183190491
OLPR01000471
204388
Verrucomicrobiota
CAT
Met
>WENV183190104
OLPR01000014
406043
Verrucomicrobiota
GCA
Cys
>WENV183190364
OLPR01000216
293125
Verrucomicrobiota
GAA
Phe
>WENV183190106
OLPR01000014
406350
Verrucomicrobiota
TGT
Thr
>WENV183190109
OLPR01000015
148006
Verrucomicrobiota
CAA
Leu
>WENV183190103
OLPR01000014
101600
Verrucomicrobiota
AAG
Leu
>WENV183190102
OLPR01000014
293105
Verrucomicrobiota
CAT
Met
>WENV183190424
OLPR01000300
405901
Verrucomicrobiota
GCC
Gly
>WENV183190277
OLPR01000120
405901
Verrucomicrobiota
GCC
Gly
>WENV183190210
OLPR01000065
483642
Verrucomicrobiota
CCC
Gly
>WENV183190249
OLPR01000094
8960
Verrucomicrobiota
CGA
Ser
>WENV183190111
OLPR01000015
101463
Verrucomicrobiota
TAA
Leu
>WENV183190506
OLPR01000529
157427
Verrucomicrobiota
GTC
Asp
>WENV183190341
OLPR01000182
157427
Verrucomicrobiota
GTC
Asp
>WENV183190107
OLPR01000014
293079
Verrucomicrobiota
CGC
Ala
>WENV183190452
OLPR01000360
120352
Verrucomicrobiota
TAG
Leu
>WENV183190112
OLPR01000015
292636
Verrucomicrobiota
>WENV183190212
OLPR01000065
489412
Verrucomicrobiota
TCC
Gly
>WENV183190278
OLPR01000120
298263
Verrucomicrobiota
TTC
Glu
>WENV183190105
OLPR01000014
298263
Verrucomicrobiota
TTC
Glu
>WENV183190227
OLPR01000079
293069
Verrucomicrobiota
CTT
Lys
>WENV183190226
OLPR01000079
293069
Verrucomicrobiota
CTT
Lys
>WENV183190110
OLPR01000015
406336
Verrucomicrobiota
CCT
Arg
>WENV183190211
OLPR01000065
406369
Verrucomicrobiota
CCG
Arg
>WENV183190705
OLPR01001424
405940
Verrucomicrobiota
GGT
Thr
>WENV183190342
OLPR01000182
406044
Verrucomicrobiota
CTG
Gln
>WENV183190366
OLPR01000216
187556
Verrucomicrobiota
GGG
Pro
>WENV183190101
OLPR01000014
406037
Verrucomicrobiota
GTG
His
>WENV183190182
OLPR01000045
406360
Verrucomicrobiota
GAC
Val
>WENV183190213
OLPR01000066
187548
Verrucomicrobiota
TCT
Arg
>WENV183190225
OLPR01000079
406040
Verrucomicrobiota
CGT
Thr
>WENV183190527
OLPR01000576
57652
Verrucomicrobiota
TGA
Ser
>WENV183190099
OLPR01000013
406039
Verrucomicrobiota
CAC
Val
>WENV183190215
OLPR01000069
75458
Verrucomicrobiota
CAG
Leu
>WENV183190100
OLPR01000013
406368
Verrucomicrobiota
TTG
Gln
>WENV183190204
OLPR01000060
21159
Verrucomicrobiota
GGA
Ser
>WENV183190166
OLPR01000037
101461
Verrucomicrobiota
GTA
Tyr
>WENV183190115
OLPR01000017
293095
Verrucomicrobiota
TTT
Lys
>WENV183190228
OLPR01000079
187561
Verrucomicrobiota
CGG
Pro
>WENV183190276
OLPR01000120
406342
Verrucomicrobiota
CAT
Met
>WENV183190165
OLPR01000037
406351
Verrucomicrobiota
GTT
Asn
>WENV183190098
OLPR01000013
303305
Verrucomicrobiota
GGC
Ala
>WENV183190181
OLPR01000045
406346
Verrucomicrobiota
TAC
Val
>WENV183190113
OLPR01000015
8938
Verrucomicrobiota
GCT
Ser
>WENV183190365
OLPR01000216
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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