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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183196047
OLPU01000098
176499
Actinomycetota
CAT
Met
>WENV183196855
OLPU01005373
175883
Actinomycetota
GAT
Ile
>WENV183196225
OLPU01000338
175907
Actinomycetota
TAC
Val
>WENV183195907
OLPU01000015
285746
Actinomycetota
GGC
Ala
>WENV183196929
OLPU01007280
14009
Actinomycetota
GGA
Ser
>WENV183196824
OLPU01004739
349003
Actinomycetota
CCG
Arg
>WENV183196520
OLPU01001333
280498
Actinomycetota
GTT
Asn
>WENV183196202
OLPU01000300
280498
Actinomycetota
GTT
Asn
>WENV183197044
OLPU01011231
280503
Actinomycetota
CCT
Arg
>WENV183196881
OLPU01006238
295964
Actinomycetota
GTT
Asn
>WENV183196415
OLPU01000823
295964
Actinomycetota
GTT
Asn
>WENV183196801
OLPU01004314
56083
Actinomycetota
CGA
Ser
>WENV183196440
OLPU01000901
140768
Actinomycetota
TAG
Leu
>WENV183196401
OLPU01000792
140768
Actinomycetota
TAG
Leu
>WENV183196228
OLPU01000348
176075
Actinomycetota
TCT
Arg
>WENV183196459
OLPU01001001
175848
Actinomycetota
TGG
Pro
>WENV183196183
OLPU01000230
176078
Actinomycetota
GGG
Pro
>WENV183196479
OLPU01001130
20208
Actinomycetota
GAG
Leu
>WENV183195965
OLPU01000043
482604
Actinomycetota
TTG
Gln
>WENV183195888
OLPU01000010
59689
Actinomycetota
GGA
Ser
>WENV183196093
OLPU01000151
175837
Actinomycetota
ACG
Arg
>WENV183196392
OLPU01000763
180826
Actinomycetota
GGG
Pro
>WENV183196213
OLPU01000311
180826
Actinomycetota
GGG
Pro
>WENV183196280
OLPU01000506
29393
Actinomycetota
GCT
Ser
>WENV183197437
OLPU01045897
280549
Actinomycetota
CAC
Val
>WENV183196466
OLPU01001018
349164
Actinomycetota
CTC
Glu
>WENV183196637
OLPU01002242
280441
Actinomycetota
CCG
Arg
>WENV183195966
OLPU01000043
280702
Actinomycetota
GGC
Ala
>WENV183196355
OLPU01000645
176077
Actinomycetota
CAT
Met
>WENV183196737
OLPU01003338
298224
Actinomycetota
GGC
Ala
>WENV183196510
OLPU01001301
298224
Actinomycetota
GGC
Ala
>WENV183196616
OLPU01001977
241064
Actinomycetota
CTC
Glu
>WENV183196362
OLPU01000675
241064
Actinomycetota
CTC
Glu
>WENV183196582
OLPU01001725
176638
Actinomycetota
GGG
Pro
>WENV183195929
OLPU01000020
280524
Actinomycetota
TGC
Ala
>WENV183195937
OLPU01000021
481719
Actinomycetota
GCA
Cys
>WENV183195935
OLPU01000021
481719
Actinomycetota
GCA
Cys
>WENV183196199
OLPU01000295
398948
Actinomycetota
TTC
Glu
>WENV183196891
OLPU01006460
291585
Actinomycetota
GCC
Gly
>WENV183196058
OLPU01000113
150272
Actinomycetota
TAA
Leu
>WENV183196278
OLPU01000506
117777
Actinomycetota
>WENV183196214
OLPU01000314
236563
Actinomycetota
CGG
Pro
>WENV183196755
OLPU01003556
280523
Actinomycetota
GGC
Ala
>WENV183196279
OLPU01000506
175949
Actinomycetota
CAT
Met
>WENV183196134
OLPU01000188
191955
Actinomycetota
TGT
Thr
>WENV183196533
OLPU01001455
175841
Actinomycetota
TAT
Ile
>WENV183196800
OLPU01004310
280544
Actinomycetota
GTG
His
>WENV183197244
OLPU01022875
280536
Actinomycetota
CTT
Lys
>WENV183196402
OLPU01000792
280496
Actinomycetota
CGT
Thr
>WENV183196251
OLPU01000421
280703
Actinomycetota
CCT
Arg
>WENV183196045
OLPU01000098
20205
Actinomycetota
GCT
Ser
>WENV183196783
OLPU01004010
175926
Actinomycetota
CAT
Met
>WENV183196400
OLPU01000792
323758
Actinomycetota
CGT
Thr
>WENV183196100
OLPU01000158
480329
Actinomycetota
CCC
Gly
>WENV183196615
OLPU01001977
483206
Actinomycetota
CTG
Gln
>WENV183196619
OLPU01001988
175882
Actinomycetota
TGG
Pro
>WENV183196548
OLPU01001511
20209
Actinomycetota
GAG
Leu
>WENV183195927
OLPU01000020
99865
Actinomycetota
CAG
Leu
>WENV183195891
OLPU01000010
222475
Actinomycetota
CTT
Lys
>WENV183196702
OLPU01002646
480319
Actinomycetota
TTG
Gln
>WENV183196079
OLPU01000141
280499
Actinomycetota
CCT
Arg
>WENV183196467
OLPU01001018
398853
Actinomycetota
CTG
Gln
>WENV183195971
OLPU01000048
398853
Actinomycetota
CTG
Gln
>WENV183196618
OLPU01001988
175843
Actinomycetota
CAA
Leu
>WENV183196458
OLPU01001001
175843
Actinomycetota
CAA
Leu
>WENV183196106
OLPU01000168
237585
Actinomycetota
TAC
Val
>WENV183196266
OLPU01000456
203883
Actinomycetota
TCT
Arg
>WENV183196181
OLPU01000229
56075
Actinomycetota
TGA
Ser
>WENV183196241
OLPU01000386
46642
Actinomycetota
CGA
Ser
>WENV183196099
OLPU01000158
104211
Actinomycetota
CAG
Leu
>WENV183196046
OLPU01000098
117903
Actinomycetota
GTA
Tyr
>WENV183196239
OLPU01000386
56071
Actinomycetota
TGA
Ser
>WENV183196791
OLPU01004132
147796
Actinomycetota
TAA
Leu
>WENV183196439
OLPU01000901
280470
Actinomycetota
CGT
Thr
>WENV183195931
OLPU01000020
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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