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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183221746
OLQL01022893
405363
Bacillota
GCA
Cys
>WENV183220703
OLQL01000342
280428
Bacillota
GAA
Phe
>WENV183220940
OLQL01001001
280428
Bacillota
GAA
Phe
>WENV183221121
OLQL01001699
405357
Bacillota
TTC
Glu
>WENV183220922
OLQL01000944
291579
Bacillota
GAA
Phe
>WENV183221104
OLQL01001630
291579
Bacillota
GAA
Phe
>WENV183221238
OLQL01002717
291579
Bacillota
GAA
Phe
>WENV183221103
OLQL01001630
179917
Bacillota
CAT
Met
>WENV183221582
OLQL01011270
175842
Bacillota
CAC
Val
>WENV183221793
OLQL01029259
184497
Bacillota
GGG
Pro
>WENV183221671
OLQL01016477
184497
Bacillota
GGG
Pro
>WENV183221258
OLQL01002916
184497
Bacillota
GGG
Pro
>WENV183221056
OLQL01001460
184497
Bacillota
GGG
Pro
>WENV183220592
OLQL01000249
184497
Bacillota
GGG
Pro
>WENV183221765
OLQL01024467
179563
Bacillota
GAT
Ile
>WENV183221350
OLQL01004061
179176
Bacillota
ACG
Arg
>WENV183221081
OLQL01001581
179176
Bacillota
ACG
Arg
>WENV183221388
OLQL01004595
184687
Bacillota
CAT
Met
>WENV183221386
OLQL01004595
184687
Bacillota
CAT
Met
>WENV183220729
OLQL01000378
184687
Bacillota
CAT
Met
>WENV183220731
OLQL01000378
184687
Bacillota
CAT
Met
>WENV183221376
OLQL01004384
295166
Bacillota
TGC
Ala
>WENV183221369
OLQL01004319
190476
Bacillota
CAT
Met
>WENV183221037
OLQL01001393
190476
Bacillota
CAT
Met
>WENV183220924
OLQL01000953
190476
Bacillota
CAT
Met
>WENV183221611
OLQL01012727
280447
Bacillota
GAC
Val
>WENV183221290
OLQL01003301
280447
Bacillota
GAC
Val
>WENV183221595
OLQL01012413
5692
Bacillota
GCT
Ser
>WENV183221958
OLQL01073539
175825
Bacillota
GAT
Ile
>WENV183221772
OLQL01026194
73009
Bacillota
CAG
Leu
>WENV183220709
OLQL01000351
481217
Bacillota
GCA
Cys
>WENV183220708
OLQL01000351
481217
Bacillota
GCA
Cys
>WENV183221608
OLQL01012641
175859
Bacillota
TCT
Arg
>WENV183221200
OLQL01002357
175859
Bacillota
TCT
Arg
>WENV183221084
OLQL01001589
175859
Bacillota
TCT
Arg
>WENV183221957
OLQL01073539
280436
Bacillota
TGC
Ala
>WENV183221444
OLQL01005587
290325
Bacillota
GCC
Gly
>WENV183221830
OLQL01036022
189679
Bacillota
GAT
Ile
>WENV183221841
OLQL01036939
187589
Bacillota
CAT
Met
>WENV183220730
OLQL01000378
294020
Bacillota
TAC
Val
>WENV183220728
OLQL01000378
294020
Bacillota
TAC
Val
>WENV183221769
OLQL01025368
480322
Bacillota
CTG
Gln
>WENV183221571
OLQL01010791
175868
Bacillota
GTT
Asn
>WENV183221570
OLQL01010791
398854
Bacillota
CTC
Glu
>WENV183220510
OLQL01000155
287280
Bacillota
TGT
Thr
>WENV183221539
OLQL01008831
480324
Bacillota
TTG
Gln
>WENV183220512
OLQL01000155
180688
Bacillota
GTC
Asp
>WENV183221518
OLQL01008320
175911
Bacillota
GTC
Asp
>WENV183221439
OLQL01005587
46655
Bacillota
TGA
Ser
>WENV183221633
OLQL01014165
186051
Bacillota
GAT
Ile
>WENV183221616
OLQL01012966
280444
Bacillota
GGT
Thr
>WENV183221639
OLQL01014553
179755
Bacillota
CCG
Arg
>WENV183221156
OLQL01001970
179755
Bacillota
CCG
Arg
>WENV183220873
OLQL01000758
179755
Bacillota
CCG
Arg
>WENV183221463
OLQL01005939
58120
Bacillota
AAG
Leu
>WENV183221277
OLQL01003127
58120
Bacillota
AAG
Leu
>WENV183220322
OLQL01000015
58120
Bacillota
AAG
Leu
>WENV183220321
OLQL01000015
58120
Bacillota
AAG
Leu
>WENV183221456
OLQL01005686
46835
Bacillota
TAA
Leu
>WENV183221370
OLQL01004319
398832
Bacillota
TTC
Glu
>WENV183221038
OLQL01001393
398832
Bacillota
TTC
Glu
>WENV183220925
OLQL01000953
398832
Bacillota
TTC
Glu
>WENV183220990
OLQL01001191
118669
Bacillota
GTA
Tyr
>WENV183221099
OLQL01001630
175915
Bacillota
GTC
Asp
>WENV183220567
OLQL01000209
280476
Bacillota
TTT
Lys
>WENV183221400
OLQL01004844
398852
Bacillota
CTC
Glu
>WENV183221810
OLQL01033058
118359
Bacillota
GTA
Tyr
>WENV183221205
OLQL01002360
118359
Bacillota
GTA
Tyr
>WENV183220360
OLQL01000034
280483
Bacillota
GAA
Phe
>WENV183220361
OLQL01000034
285756
Bacillota
GCC
Gly
>WENV183220337
OLQL01000018
285756
Bacillota
GCC
Gly
>WENV183221140
OLQL01001839
280463
Bacillota
TTT
Lys
>WENV183220545
OLQL01000187
280463
Bacillota
TTT
Lys
>WENV183220402
OLQL01000052
179166
Bacillota
TCT
Arg
>WENV183221969
OLQL01079099
280486
Bacillota
TGC
Ala
>WENV183221594
OLQL01012413
56074
Bacillota
TGA
Ser
>WENV183221902
OLQL01051234
482078
Bacillota
CCC
Gly
>WENV183221870
OLQL01040956
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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