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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183229164
OLQS01000114
172207
Bacteroidota
GGG
Pro
>WENV183229343
OLQS01000807
172207
Bacteroidota
GGG
Pro
>WENV183229460
OLQS01001917
398829
Bacteroidota
CCT
Arg
>WENV183229248
OLQS01000344
175838
Bacteroidota
GTT
Asn
>WENV183229832
OLQS01039945
404226
Bacteroidota
CCT
Arg
>WENV183229835
OLQS01042330
175904
Bacteroidota
CGG
Pro
>WENV183229411
OLQS01001381
280553
Bacteroidota
TTT
Lys
>WENV183229502
OLQS01002613
280557
Bacteroidota
CAT
Met
>WENV183229219
OLQS01000238
280557
Bacteroidota
CAT
Met
>WENV183229645
OLQS01006965
20492
Bacteroidota
GGA
Ser
>WENV183229749
OLQS01018039
20206
Bacteroidota
GGA
Ser
>WENV183229770
OLQS01023365
398871
Bacteroidota
TTC
Glu
>WENV183229272
OLQS01000453
56493
Bacteroidota
TGA
Ser
>WENV183229282
OLQS01000502
56493
Bacteroidota
TGA
Ser
>WENV183229600
OLQS01004975
175906
Bacteroidota
GTG
His
>WENV183229245
OLQS01000324
175903
Bacteroidota
GTG
His
>WENV183229155
OLQS01000108
351598
Bacteroidota
CGG
Pro
>WENV183229218
OLQS01000233
118089
Bacteroidota
TAG
Leu
>WENV183229763
OLQS01020936
20449
Bacteroidota
GGA
Ser
>WENV183229485
OLQS01002111
56072
Bacteroidota
TAA
Leu
>WENV183229317
OLQS01000657
480404
Bacteroidota
TTG
Gln
>WENV183229513
OLQS01002922
280451
Bacteroidota
CGT
Thr
>WENV183229231
OLQS01000269
99847
Bacteroidota
GTA
Tyr
>WENV183229410
OLQS01001374
99847
Bacteroidota
GTA
Tyr
>WENV183229624
OLQS01005883
99847
Bacteroidota
GTA
Tyr
>WENV183229500
OLQS01002565
399200
Bacteroidota
CAT
Met
>WENV183229223
OLQS01000253
399200
Bacteroidota
CAT
Met
>WENV183229598
OLQS01004956
488746
Bacteroidota
CTG
Gln
>WENV183229347
OLQS01000838
280478
Bacteroidota
GCC
Gly
>WENV183229271
OLQS01000446
27524
Bacteroidota
GGA
Ser
>WENV183229833
OLQS01041202
175844
Bacteroidota
GGC
Ala
>WENV183229753
OLQS01018681
73011
Bacteroidota
CAA
Leu
>WENV183229381
OLQS01001103
398828
Bacteroidota
CCG
Arg
>WENV183229192
OLQS01000153
398828
Bacteroidota
CCG
Arg
>WENV183229476
OLQS01002042
74084
Bacteroidota
CAG
Leu
>WENV183229498
OLQS01002444
159415
Bacteroidota
TAC
Val
>WENV183229591
OLQS01004583
140771
Bacteroidota
>WENV183229588
OLQS01004583
140771
Bacteroidota
>WENV183229667
OLQS01008293
400088
Bacteroidota
GGT
Thr
>WENV183229627
OLQS01006063
69204
Bacteroidota
TGA
Ser
>WENV183229372
OLQS01000990
280446
Bacteroidota
TTT
Lys
>WENV183229684
OLQS01009866
484496
Bacteroidota
TTG
Gln
>WENV183229365
OLQS01000945
27502
Bacteroidota
GGA
Ser
>WENV183229338
OLQS01000787
285750
Bacteroidota
CCC
Gly
>WENV183229778
OLQS01026012
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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