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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183235202
OLQW01005506
99852
Bacillota
GTA
Tyr
>WENV183234990
OLQW01000973
405363
Bacillota
GCA
Cys
>WENV183234912
OLQW01000572
280428
Bacillota
GAA
Phe
>WENV183234923
OLQW01000597
229015
Bacillota
GTG
His
>WENV183235163
OLQW01004040
179917
Bacillota
CAT
Met
>WENV183234917
OLQW01000590
284746
Bacillota
CTG
Gln
>WENV183234827
OLQW01000260
280492
Bacillota
CTT
Lys
>WENV183234766
OLQW01000089
280492
Bacillota
CTT
Lys
>WENV183235249
OLQW01007347
175842
Bacillota
CAC
Val
>WENV183235050
OLQW01001796
175842
Bacillota
CAC
Val
>WENV183235445
OLQW01030812
184497
Bacillota
GGG
Pro
>WENV183235013
OLQW01001246
190476
Bacillota
CAT
Met
>WENV183234943
OLQW01000700
190476
Bacillota
CAT
Met
>WENV183235008
OLQW01001116
73664
Bacillota
CAG
Leu
>WENV183234935
OLQW01000633
280447
Bacillota
GAC
Val
>WENV183235158
OLQW01003869
5692
Bacillota
GCT
Ser
>WENV183234951
OLQW01000748
5692
Bacillota
GCT
Ser
>WENV183235094
OLQW01002520
359682
Bacillota
TAC
Val
>WENV183234770
OLQW01000098
284723
Bacillota
TAC
Val
>WENV183235159
OLQW01003941
73009
Bacillota
CAG
Leu
>WENV183234915
OLQW01000578
73009
Bacillota
CAG
Leu
>WENV183235177
OLQW01004381
481217
Bacillota
GCA
Cys
>WENV183235194
OLQW01005078
280646
Bacillota
TGC
Ala
>WENV183235005
OLQW01001106
291581
Bacillota
CGG
Pro
>WENV183234809
OLQW01000186
291581
Bacillota
CGG
Pro
>WENV183235142
OLQW01003484
175859
Bacillota
TCT
Arg
>WENV183235040
OLQW01001687
175859
Bacillota
TCT
Arg
>WENV183235110
OLQW01002820
175831
Bacillota
ACG
Arg
>WENV183234922
OLQW01000597
179810
Bacillota
TCT
Arg
>WENV183235004
OLQW01001106
480322
Bacillota
CTG
Gln
>WENV183234945
OLQW01000713
480322
Bacillota
CTG
Gln
>WENV183234808
OLQW01000186
480322
Bacillota
CTG
Gln
>WENV183235192
OLQW01005002
480322
Bacillota
CTG
Gln
>WENV183235022
OLQW01001328
480322
Bacillota
CTG
Gln
>WENV183234860
OLQW01000364
175868
Bacillota
GTT
Asn
>WENV183234938
OLQW01000665
284744
Bacillota
TTT
Lys
>WENV183234900
OLQW01000500
398854
Bacillota
CTC
Glu
>WENV183235241
OLQW01007064
291576
Bacillota
CCC
Gly
>WENV183235015
OLQW01001251
291576
Bacillota
CCC
Gly
>WENV183235399
OLQW01022186
287280
Bacillota
TGT
Thr
>WENV183234989
OLQW01000973
480324
Bacillota
TTG
Gln
>WENV183234954
OLQW01000771
480324
Bacillota
TTG
Gln
>WENV183234972
OLQW01000901
400963
Bacillota
GTT
Asn
>WENV183234960
OLQW01000816
497729
Bacillota
CCA
Trp
>WENV183234868
OLQW01000411
497729
Bacillota
CCA
Trp
>WENV183235456
OLQW01033747
73638
Bacillota
AAG
Leu
>WENV183235007
OLQW01001116
56079
Bacillota
AAG
Leu
>WENV183234800
OLQW01000171
56079
Bacillota
AAG
Leu
>WENV183235092
OLQW01002520
179935
Bacillota
GTC
Asp
>WENV183235034
OLQW01001564
204381
Bacillota
GAT
Ile
>WENV183234749
OLQW01000056
117745
Bacillota
GTA
Tyr
>WENV183234775
OLQW01000102
280444
Bacillota
GGT
Thr
>WENV183234788
OLQW01000140
46643
Bacillota
TGA
Ser
>WENV183235133
OLQW01003274
179755
Bacillota
CCG
Arg
>WENV183235071
OLQW01002213
179755
Bacillota
CCG
Arg
>WENV183234939
OLQW01000665
401111
Bacillota
TTC
Glu
>WENV183234694
OLQW01000002
46835
Bacillota
TAA
Leu
>WENV183235093
OLQW01002520
284742
Bacillota
GAA
Phe
>WENV183235014
OLQW01001246
398832
Bacillota
TTC
Glu
>WENV183234944
OLQW01000700
398832
Bacillota
TTC
Glu
>WENV183234855
OLQW01000354
280476
Bacillota
TTT
Lys
>WENV183234846
OLQW01000296
280462
Bacillota
GAA
Phe
>WENV183234750
OLQW01000056
398852
Bacillota
CTC
Glu
>WENV183235440
OLQW01029664
201856
Bacillota
GAT
Ile
>WENV183234971
OLQW01000873
285601
Bacillota
TTC
Glu
>WENV183235057
OLQW01001958
398833
Bacillota
TGT
Thr
>WENV183235359
OLQW01017185
175849
Bacillota
GTC
Asp
>WENV183235157
OLQW01003869
56074
Bacillota
TGA
Ser
>WENV183234950
OLQW01000748
56074
Bacillota
TGA
Ser
>WENV183235188
OLQW01004823
280473
Bacillota
TGG
Pro
>WENV183235126
OLQW01003160
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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