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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183243551
OLRD01000204
406043
Verrucomicrobiota
GCA
Cys
>WENV183243526
OLRD01000170
293125
Verrucomicrobiota
GAA
Phe
>WENV183243519
OLRD01000164
406350
Verrucomicrobiota
TGT
Thr
>WENV183243743
OLRD01000812
148006
Verrucomicrobiota
CAA
Leu
>WENV183243550
OLRD01000204
101600
Verrucomicrobiota
AAG
Leu
>WENV183243952
OLRD01001944
293105
Verrucomicrobiota
CAT
Met
>WENV183243685
OLRD01000569
405901
Verrucomicrobiota
GCC
Gly
>WENV183243646
OLRD01000454
405901
Verrucomicrobiota
GCC
Gly
>WENV183243984
OLRD01002246
483642
Verrucomicrobiota
CCC
Gly
>WENV183243569
OLRD01000248
229220
Verrucomicrobiota
CAT
Met
>WENV183243443
OLRD01000077
8960
Verrucomicrobiota
CGA
Ser
>WENV183243672
OLRD01000536
101463
Verrucomicrobiota
TAA
Leu
>WENV183243554
OLRD01000207
157427
Verrucomicrobiota
GTC
Asp
>WENV183243384
OLRD01000024
157427
Verrucomicrobiota
GTC
Asp
>WENV183243520
OLRD01000164
293079
Verrucomicrobiota
CGC
Ala
>WENV183243862
OLRD01001347
120352
Verrucomicrobiota
TAG
Leu
>WENV183243673
OLRD01000536
292636
Verrucomicrobiota
>WENV183243985
OLRD01002246
489412
Verrucomicrobiota
TCC
Gly
>WENV183243647
OLRD01000454
298263
Verrucomicrobiota
TTC
Glu
>WENV183243552
OLRD01000204
298263
Verrucomicrobiota
TTC
Glu
>WENV183243897
OLRD01001533
293069
Verrucomicrobiota
CTT
Lys
>WENV183243896
OLRD01001533
293069
Verrucomicrobiota
CTT
Lys
>WENV183243915
OLRD01001724
406336
Verrucomicrobiota
CCT
Arg
>WENV183243659
OLRD01000499
406369
Verrucomicrobiota
CCG
Arg
>WENV183243434
OLRD01000061
405940
Verrucomicrobiota
GGT
Thr
>WENV183243553
OLRD01000207
406044
Verrucomicrobiota
CTG
Gln
>WENV183243528
OLRD01000170
187556
Verrucomicrobiota
GGG
Pro
>WENV183243951
OLRD01001944
406037
Verrucomicrobiota
GTG
His
>WENV183243515
OLRD01000159
406360
Verrucomicrobiota
GAC
Val
>WENV183243744
OLRD01000816
187548
Verrucomicrobiota
TCT
Arg
>WENV183244271
OLRD01020446
406040
Verrucomicrobiota
CGT
Thr
>WENV183243510
OLRD01000147
57652
Verrucomicrobiota
TGA
Ser
>WENV183243469
OLRD01000092
406039
Verrucomicrobiota
CAC
Val
>WENV183243658
OLRD01000497
75458
Verrucomicrobiota
CAG
Leu
>WENV183243828
OLRD01001186
406368
Verrucomicrobiota
TTG
Gln
>WENV183243385
OLRD01000024
21159
Verrucomicrobiota
GGA
Ser
>WENV183243390
OLRD01000026
101461
Verrucomicrobiota
GTA
Tyr
>WENV183243700
OLRD01000633
293095
Verrucomicrobiota
TTT
Lys
>WENV183243821
OLRD01001146
187561
Verrucomicrobiota
CGG
Pro
>WENV183243509
OLRD01000147
406342
Verrucomicrobiota
CAT
Met
>WENV183243389
OLRD01000026
406351
Verrucomicrobiota
GTT
Asn
>WENV183243713
OLRD01000726
303305
Verrucomicrobiota
GGC
Ala
>WENV183243514
OLRD01000159
406346
Verrucomicrobiota
TAC
Val
>WENV183243674
OLRD01000536
8938
Verrucomicrobiota
GCT
Ser
>WENV183243527
OLRD01000170
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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