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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183244623
OLRE01000203
117741
Bacteroidota
TAG
Leu
>WENV183244406
OLRE01000015
398829
Bacteroidota
CCT
Arg
>WENV183244454
OLRE01000047
289031
Bacteroidota
CAT
Met
>WENV183244838
OLRE01000505
289031
Bacteroidota
CAT
Met
>WENV183244979
OLRE01000851
280557
Bacteroidota
CAT
Met
>WENV183244591
OLRE01000156
20206
Bacteroidota
GGA
Ser
>WENV183244957
OLRE01000798
483416
Bacteroidota
CTG
Gln
>WENV183244491
OLRE01000070
483416
Bacteroidota
CTG
Gln
>WENV183245348
OLRE01002623
56493
Bacteroidota
TGA
Ser
>WENV183244488
OLRE01000065
175903
Bacteroidota
GTG
His
>WENV183245211
OLRE01001855
351598
Bacteroidota
CGG
Pro
>WENV183244691
OLRE01000275
405877
Bacteroidota
GGT
Thr
>WENV183245590
OLRE01006018
182267
Bacteroidota
GTT
Asn
>WENV183244916
OLRE01000677
21127
Bacteroidota
GGA
Ser
>WENV183244405
OLRE01000014
56072
Bacteroidota
TAA
Leu
>WENV183245185
OLRE01001741
57807
Bacteroidota
TGA
Ser
>WENV183244459
OLRE01000049
57807
Bacteroidota
TGA
Ser
>WENV183245660
OLRE01007964
175886
Bacteroidota
GGC
Ala
>WENV183244746
OLRE01000322
175902
Bacteroidota
GGC
Ala
>WENV183245688
OLRE01008733
179697
Bacteroidota
TGT
Thr
>WENV183245962
OLRE01030122
398860
Bacteroidota
CTC
Glu
>WENV183244433
OLRE01000034
280451
Bacteroidota
CGT
Thr
>WENV183245988
OLRE01034564
418894
Bacteroidota
TTC
Glu
>WENV183244420
OLRE01000029
99847
Bacteroidota
GTA
Tyr
>WENV183245653
OLRE01007751
99847
Bacteroidota
GTA
Tyr
>WENV183246101
OLRE01063739
186874
Bacteroidota
CAT
Met
>WENV183244966
OLRE01000821
332896
Bacteroidota
TTT
Lys
>WENV183244590
OLRE01000156
488746
Bacteroidota
CTG
Gln
>WENV183245274
OLRE01002237
175844
Bacteroidota
GGC
Ala
>WENV183244553
OLRE01000124
158068
Bacteroidota
GGG
Pro
>WENV183244809
OLRE01000426
398828
Bacteroidota
CCG
Arg
>WENV183244656
OLRE01000233
140771
Bacteroidota
>WENV183245777
OLRE01012757
176192
Bacteroidota
TCT
Arg
>WENV183244694
OLRE01000280
484496
Bacteroidota
TTG
Gln
>WENV183245906
OLRE01022118
398836
Bacteroidota
GCA
Cys
>WENV183244544
OLRE01000116
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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