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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183255856
OLRK01001759
117741
Bacteroidota
TAG
Leu
>WENV183256056
OLRK01004702
175838
Bacteroidota
GTT
Asn
>WENV183255680
OLRK01000829
289031
Bacteroidota
CAT
Met
>WENV183255939
OLRK01002563
280557
Bacteroidota
CAT
Met
>WENV183255726
OLRK01001044
483416
Bacteroidota
CTG
Gln
>WENV183256543
OLRK01063477
56493
Bacteroidota
TGA
Ser
>WENV183256134
OLRK01006737
175903
Bacteroidota
GTG
His
>WENV183256570
OLRK01074324
175936
Bacteroidota
CAT
Met
>WENV183255974
OLRK01003334
57807
Bacteroidota
TGA
Ser
>WENV183256185
OLRK01008678
175902
Bacteroidota
GGC
Ala
>WENV183256513
OLRK01053246
398860
Bacteroidota
CTC
Glu
>WENV183256049
OLRK01004567
99847
Bacteroidota
GTA
Tyr
>WENV183255588
OLRK01000610
186874
Bacteroidota
CAT
Met
>WENV183256408
OLRK01027862
332896
Bacteroidota
TTT
Lys
>WENV183256013
OLRK01003832
488746
Bacteroidota
CTG
Gln
>WENV183256361
OLRK01021957
175844
Bacteroidota
GGC
Ala
>WENV183256495
OLRK01047975
480318
Bacteroidota
CTG
Gln
>WENV183256264
OLRK01013738
398828
Bacteroidota
CCG
Arg
>WENV183256288
OLRK01015104
140771
Bacteroidota
>WENV183256206
OLRK01010041
176192
Bacteroidota
TCT
Arg
>WENV183256397
OLRK01027173
280446
Bacteroidota
TTT
Lys
>WENV183256083
OLRK01005354
484496
Bacteroidota
TTG
Gln
>WENV183256353
OLRK01021475
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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