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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183267637
OLRU01000412
179231
Actinomycetota
TAC
Val
>WENV183269081
OLRU01095030
176499
Actinomycetota
CAT
Met
>WENV183267356
OLRU01000094
175907
Actinomycetota
TAC
Val
>WENV183267625
OLRU01000385
285746
Actinomycetota
GGC
Ala
>WENV183268218
OLRU01002652
14009
Actinomycetota
GGA
Ser
>WENV183267749
OLRU01000655
147806
Actinomycetota
TAA
Leu
>WENV183267516
OLRU01000262
280498
Actinomycetota
GTT
Asn
>WENV183267514
OLRU01000262
280498
Actinomycetota
GTT
Asn
>WENV183267513
OLRU01000262
280498
Actinomycetota
GTT
Asn
>WENV183267436
OLRU01000173
280498
Actinomycetota
GTT
Asn
>WENV183267304
OLRU01000044
280498
Actinomycetota
GTT
Asn
>WENV183267717
OLRU01000582
295964
Actinomycetota
GTT
Asn
>WENV183267716
OLRU01000582
295964
Actinomycetota
GTT
Asn
>WENV183267452
OLRU01000204
295964
Actinomycetota
GTT
Asn
>WENV183267249
OLRU01000016
56083
Actinomycetota
CGA
Ser
>WENV183267488
OLRU01000239
140768
Actinomycetota
TAG
Leu
>WENV183267591
OLRU01000338
176075
Actinomycetota
TCT
Arg
>WENV183267302
OLRU01000042
176078
Actinomycetota
GGG
Pro
>WENV183267757
OLRU01000669
20208
Actinomycetota
GAG
Leu
>WENV183267219
OLRU01000007
59689
Actinomycetota
GGA
Ser
>WENV183267990
OLRU01001334
175837
Actinomycetota
ACG
Arg
>WENV183267989
OLRU01001334
175837
Actinomycetota
ACG
Arg
>WENV183267795
OLRU01000737
175837
Actinomycetota
ACG
Arg
>WENV183267794
OLRU01000737
175837
Actinomycetota
ACG
Arg
>WENV183267374
OLRU01000109
175837
Actinomycetota
ACG
Arg
>WENV183267373
OLRU01000109
175837
Actinomycetota
ACG
Arg
>WENV183268015
OLRU01001458
180826
Actinomycetota
GGG
Pro
>WENV183267322
OLRU01000055
180826
Actinomycetota
GGG
Pro
>WENV183267248
OLRU01000016
29393
Actinomycetota
GCT
Ser
>WENV183267486
OLRU01000239
280549
Actinomycetota
CAC
Val
>WENV183268207
OLRU01002582
280702
Actinomycetota
GGC
Ala
>WENV183268193
OLRU01002516
280702
Actinomycetota
GGC
Ala
>WENV183267366
OLRU01000098
176077
Actinomycetota
CAT
Met
>WENV183267820
OLRU01000794
176638
Actinomycetota
GGG
Pro
>WENV183267438
OLRU01000173
176638
Actinomycetota
GGG
Pro
>WENV183268338
OLRU01003721
280524
Actinomycetota
TGC
Ala
>WENV183268216
OLRU01002649
280524
Actinomycetota
TGC
Ala
>WENV183267553
OLRU01000294
280524
Actinomycetota
TGC
Ala
>WENV183268258
OLRU01003062
481719
Actinomycetota
GCA
Cys
>WENV183267244
OLRU01000016
398948
Actinomycetota
TTC
Glu
>WENV183268681
OLRU01014525
176723
Actinomycetota
TCT
Arg
>WENV183267578
OLRU01000324
150272
Actinomycetota
TAA
Leu
>WENV183267246
OLRU01000016
117777
Actinomycetota
>WENV183268339
OLRU01003721
280523
Actinomycetota
GGC
Ala
>WENV183268217
OLRU01002649
280523
Actinomycetota
GGC
Ala
>WENV183267515
OLRU01000262
280523
Actinomycetota
GGC
Ala
>WENV183267303
OLRU01000044
280523
Actinomycetota
GGC
Ala
>WENV183267247
OLRU01000016
175949
Actinomycetota
CAT
Met
>WENV183267551
OLRU01000294
191955
Actinomycetota
TGT
Thr
>WENV183267371
OLRU01000105
175841
Actinomycetota
TAT
Ile
>WENV183267590
OLRU01000338
280544
Actinomycetota
GTG
His
>WENV183267489
OLRU01000239
280496
Actinomycetota
CGT
Thr
>WENV183267583
OLRU01000333
175872
Actinomycetota
GTC
Asp
>WENV183267367
OLRU01000098
280703
Actinomycetota
CCT
Arg
>WENV183268356
OLRU01003996
20205
Actinomycetota
GCT
Ser
>WENV183268352
OLRU01003922
20205
Actinomycetota
GCT
Ser
>WENV183267701
OLRU01000539
280450
Actinomycetota
TTT
Lys
>WENV183267487
OLRU01000239
323758
Actinomycetota
CGT
Thr
>WENV183268780
OLRU01022440
358727
Actinomycetota
CCG
Arg
>WENV183267704
OLRU01000547
358727
Actinomycetota
CCG
Arg
>WENV183268669
OLRU01013939
480329
Actinomycetota
CCC
Gly
>WENV183268898
OLRU01038505
175882
Actinomycetota
TGG
Pro
>WENV183268102
OLRU01001948
175882
Actinomycetota
TGG
Pro
>WENV183267483
OLRU01000230
20209
Actinomycetota
GAG
Leu
>WENV183267442
OLRU01000185
99865
Actinomycetota
CAG
Leu
>WENV183267223
OLRU01000007
222475
Actinomycetota
CTT
Lys
>WENV183268063
OLRU01001691
480319
Actinomycetota
TTG
Gln
>WENV183267902
OLRU01001044
480319
Actinomycetota
TTG
Gln
>WENV183267630
OLRU01000393
280489
Actinomycetota
CTC
Glu
>WENV183267828
OLRU01000816
280499
Actinomycetota
CCT
Arg
>WENV183267221
OLRU01000007
398853
Actinomycetota
CTG
Gln
>WENV183267631
OLRU01000393
398853
Actinomycetota
CTG
Gln
>WENV183268230
OLRU01002758
176642
Actinomycetota
CAA
Leu
>WENV183268392
OLRU01004805
176642
Actinomycetota
CAA
Leu
>WENV183268101
OLRU01001948
175843
Actinomycetota
CAA
Leu
>WENV183267579
OLRU01000324
175843
Actinomycetota
CAA
Leu
>WENV183268270
OLRU01003138
237585
Actinomycetota
TAC
Val
>WENV183268612
OLRU01010781
203883
Actinomycetota
TCT
Arg
>WENV183267250
OLRU01000016
56075
Actinomycetota
TGA
Ser
>WENV183267931
OLRU01001099
46642
Actinomycetota
CGA
Ser
>WENV183267585
OLRU01000333
46642
Actinomycetota
CGA
Ser
>WENV183267723
OLRU01000597
104211
Actinomycetota
CAG
Leu
>WENV183269080
OLRU01095030
117903
Actinomycetota
GTA
Tyr
>WENV183267586
OLRU01000333
56071
Actinomycetota
TGA
Ser
>WENV183267552
OLRU01000294
179238
Actinomycetota
GAT
Ile
>WENV183267656
OLRU01000451
147796
Actinomycetota
TAA
Leu
>WENV183268206
OLRU01002582
506175
Actinomycetota
TTG
Gln
>WENV183268366
OLRU01004203
280470
Actinomycetota
CGT
Thr
>WENV183268111
OLRU01002025
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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