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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183267895
OLRU01001022
117741
Bacteroidota
TAG
Leu
>WENV183268190
OLRU01002483
398829
Bacteroidota
CCT
Arg
>WENV183268880
OLRU01034511
404226
Bacteroidota
CCT
Arg
>WENV183268822
OLRU01026116
175904
Bacteroidota
CGG
Pro
>WENV183268387
OLRU01004683
289031
Bacteroidota
CAT
Met
>WENV183267484
OLRU01000231
280557
Bacteroidota
CAT
Met
>WENV183268374
OLRU01004422
20492
Bacteroidota
GGA
Ser
>WENV183268118
OLRU01002065
20206
Bacteroidota
GGA
Ser
>WENV183267572
OLRU01000317
483416
Bacteroidota
CTG
Gln
>WENV183268728
OLRU01018261
56493
Bacteroidota
TGA
Ser
>WENV183267945
OLRU01001187
351598
Bacteroidota
CGG
Pro
>WENV183268795
OLRU01023943
118089
Bacteroidota
TAG
Leu
>WENV183268732
OLRU01018439
398872
Bacteroidota
GGT
Thr
>WENV183268762
OLRU01021460
172085
Bacteroidota
TAC
Val
>WENV183268801
OLRU01024544
405877
Bacteroidota
GGT
Thr
>WENV183268517
OLRU01007537
29791
Bacteroidota
GCT
Ser
>WENV183268037
OLRU01001560
182267
Bacteroidota
GTT
Asn
>WENV183268036
OLRU01001560
182267
Bacteroidota
GTT
Asn
>WENV183268502
OLRU01006986
20449
Bacteroidota
GGA
Ser
>WENV183268350
OLRU01003908
175886
Bacteroidota
GGC
Ala
>WENV183268401
OLRU01004968
175902
Bacteroidota
GGC
Ala
>WENV183268446
OLRU01005973
179697
Bacteroidota
TGT
Thr
>WENV183268518
OLRU01007537
398860
Bacteroidota
CTC
Glu
>WENV183267818
OLRU01000792
174201
Bacteroidota
GGG
Pro
>WENV183267643
OLRU01000424
174201
Bacteroidota
GGG
Pro
>WENV183267457
OLRU01000210
174201
Bacteroidota
GGG
Pro
>WENV183268828
OLRU01026409
280451
Bacteroidota
CGT
Thr
>WENV183268712
OLRU01016981
418894
Bacteroidota
TTC
Glu
>WENV183268330
OLRU01003642
99847
Bacteroidota
GTA
Tyr
>WENV183268960
OLRU01052895
399200
Bacteroidota
CAT
Met
>WENV183268889
OLRU01036190
186874
Bacteroidota
CAT
Met
>WENV183267642
OLRU01000424
488746
Bacteroidota
CTG
Gln
>WENV183269013
OLRU01069849
280478
Bacteroidota
GCC
Gly
>WENV183268942
OLRU01049934
175844
Bacteroidota
GGC
Ala
>WENV183268654
OLRU01013059
73011
Bacteroidota
CAA
Leu
>WENV183268705
OLRU01016145
280515
Bacteroidota
CCA
Trp
>WENV183268650
OLRU01012833
183889
Bacteroidota
GGC
Ala
>WENV183267883
OLRU01000983
398828
Bacteroidota
CCG
Arg
>WENV183268679
OLRU01014282
74084
Bacteroidota
CAG
Leu
>WENV183268707
OLRU01016696
159415
Bacteroidota
TAC
Val
>WENV183268895
OLRU01038172
480325
Bacteroidota
CTG
Gln
>WENV183268750
OLRU01019807
280446
Bacteroidota
TTT
Lys
>WENV183268507
OLRU01007094
280446
Bacteroidota
TTT
Lys
>WENV183267556
OLRU01000300
280446
Bacteroidota
TTT
Lys
>WENV183267550
OLRU01000291
280446
Bacteroidota
TTT
Lys
>WENV183267449
OLRU01000194
280446
Bacteroidota
TTT
Lys
>WENV183268260
OLRU01003067
484496
Bacteroidota
TTG
Gln
>WENV183267559
OLRU01000303
484496
Bacteroidota
TTG
Gln
>WENV183268368
OLRU01004217
27502
Bacteroidota
GGA
Ser
>WENV183267232
OLRU01000010
27502
Bacteroidota
GGA
Ser
>WENV183268614
OLRU01010919
365112
Bacteroidota
TTT
Lys
>WENV183268362
OLRU01004114
365112
Bacteroidota
TTT
Lys
>WENV183268583
OLRU01009461
398836
Bacteroidota
GCA
Cys
>WENV183267561
OLRU01000305
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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