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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183272028
OLRW01003024
175883
Actinomycetota
GAT
Ile
>WENV183272030
OLRW01003024
175883
Actinomycetota
GAT
Ile
>WENV183271416
OLRW01000023
175907
Actinomycetota
TAC
Val
>WENV183271576
OLRW01000178
285746
Actinomycetota
GGC
Ala
>WENV183271888
OLRW01001463
14009
Actinomycetota
GGA
Ser
>WENV183271887
OLRW01001459
280498
Actinomycetota
GTT
Asn
>WENV183272085
OLRW01003927
280503
Actinomycetota
CCT
Arg
>WENV183271527
OLRW01000117
56083
Actinomycetota
CGA
Ser
>WENV183271429
OLRW01000029
140768
Actinomycetota
TAG
Leu
>WENV183271419
OLRW01000025
176075
Actinomycetota
TCT
Arg
>WENV183271374
OLRW01000007
175848
Actinomycetota
TGG
Pro
>WENV183271523
OLRW01000111
176078
Actinomycetota
GGG
Pro
>WENV183271372
OLRW01000007
482604
Actinomycetota
TTG
Gln
>WENV183271408
OLRW01000015
59689
Actinomycetota
GGA
Ser
>WENV183271371
OLRW01000007
175837
Actinomycetota
ACG
Arg
>WENV183271526
OLRW01000117
29393
Actinomycetota
GCT
Ser
>WENV183271427
OLRW01000029
280549
Actinomycetota
CAC
Val
>WENV183271373
OLRW01000007
280702
Actinomycetota
GGC
Ala
>WENV183272213
OLRW01008122
398843
Actinomycetota
GTT
Asn
>WENV183271361
OLRW01000005
176077
Actinomycetota
CAT
Met
>WENV183271480
OLRW01000065
21508
Actinomycetota
GAG
Leu
>WENV183271731
OLRW01000543
280524
Actinomycetota
TGC
Ala
>WENV183271533
OLRW01000123
481719
Actinomycetota
GCA
Cys
>WENV183271363
OLRW01000005
398948
Actinomycetota
TTC
Glu
>WENV183272105
OLRW01004533
291585
Actinomycetota
GCC
Gly
>WENV183271369
OLRW01000007
150272
Actinomycetota
TAA
Leu
>WENV183271524
OLRW01000117
117777
Actinomycetota
>WENV183271525
OLRW01000117
175949
Actinomycetota
CAT
Met
>WENV183271426
OLRW01000029
418252
Actinomycetota
GAC
Val
>WENV183271509
OLRW01000094
191955
Actinomycetota
TGT
Thr
>WENV183271418
OLRW01000025
280544
Actinomycetota
GTG
His
>WENV183272059
OLRW01003539
280536
Actinomycetota
CTT
Lys
>WENV183271430
OLRW01000029
280496
Actinomycetota
CGT
Thr
>WENV183271362
OLRW01000005
280703
Actinomycetota
CCT
Arg
>WENV183271875
OLRW01001365
175926
Actinomycetota
CAT
Met
>WENV183271406
OLRW01000015
280450
Actinomycetota
TTT
Lys
>WENV183271428
OLRW01000029
323758
Actinomycetota
CGT
Thr
>WENV183271903
OLRW01001582
483206
Actinomycetota
CTG
Gln
>WENV183271737
OLRW01000560
99865
Actinomycetota
CAG
Leu
>WENV183271407
OLRW01000015
222475
Actinomycetota
CTT
Lys
>WENV183271370
OLRW01000007
175843
Actinomycetota
CAA
Leu
>WENV183271358
OLRW01000005
56075
Actinomycetota
TGA
Ser
>WENV183271424
OLRW01000029
317680
Actinomycetota
CCG
Arg
>WENV183271405
OLRW01000015
430848
Actinomycetota
CTG
Gln
>WENV183271404
OLRW01000015
289788
Actinomycetota
CTC
Glu
>WENV183271730
OLRW01000543
179238
Actinomycetota
GAT
Ile
>WENV183271977
OLRW01002377
480376
Actinomycetota
CCC
Gly
>WENV183271679
OLRW01000417
176162
Actinomycetota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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