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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183287054
OLSF01000222
99852
Bacillota
GTA
Tyr
>WENV183287040
OLSF01000208
343590
Bacillota
GCC
Gly
>WENV183287309
OLSF01001053
343590
Bacillota
GCC
Gly
>WENV183287310
OLSF01001053
343590
Bacillota
GCC
Gly
>WENV183288175
OLSF01030327
280500
Bacillota
TGC
Ala
>WENV183287187
OLSF01000523
349107
Bacillota
GCC
Gly
>WENV183287498
OLSF01002151
349107
Bacillota
GCC
Gly
>WENV183287837
OLSF01006957
405363
Bacillota
GCA
Cys
>WENV183287225
OLSF01000706
290391
Bacillota
TAC
Val
>WENV183287186
OLSF01000523
280428
Bacillota
GAA
Phe
>WENV183287956
OLSF01011970
280466
Bacillota
TAC
Val
>WENV183287499
OLSF01002151
280466
Bacillota
TAC
Val
>WENV183288130
OLSF01024685
175842
Bacillota
CAC
Val
>WENV183287243
OLSF01000757
291629
Bacillota
CCA
Trp
>WENV183288071
OLSF01017448
236579
Bacillota
GAT
Ile
>WENV183287736
OLSF01004879
348419
Bacillota
GTT
Asn
>WENV183287826
OLSF01006849
184497
Bacillota
GGG
Pro
>WENV183287046
OLSF01000217
184497
Bacillota
GGG
Pro
>WENV183287655
OLSF01003846
179176
Bacillota
ACG
Arg
>WENV183287000
OLSF01000137
179176
Bacillota
ACG
Arg
>WENV183287423
OLSF01001655
406553
Bacillota
TTG
Gln
>WENV183288011
OLSF01014121
190476
Bacillota
CAT
Met
>WENV183287640
OLSF01003649
190476
Bacillota
CAT
Met
>WENV183287313
OLSF01001068
82124
Bacillota
TAA
Leu
>WENV183287475
OLSF01002028
73664
Bacillota
CAG
Leu
>WENV183287098
OLSF01000308
73664
Bacillota
CAG
Leu
>WENV183287570
OLSF01002811
280447
Bacillota
GAC
Val
>WENV183287392
OLSF01001504
280447
Bacillota
GAC
Val
>WENV183287296
OLSF01000991
280447
Bacillota
GAC
Val
>WENV183287710
OLSF01004590
5692
Bacillota
GCT
Ser
>WENV183287671
OLSF01004189
5692
Bacillota
GCT
Ser
>WENV183287354
OLSF01001325
5692
Bacillota
GCT
Ser
>WENV183286961
OLSF01000091
312274
Bacillota
GGC
Ala
>WENV183287120
OLSF01000361
186123
Bacillota
GTC
Asp
>WENV183287218
OLSF01000678
73009
Bacillota
CAG
Leu
>WENV183287520
OLSF01002309
481217
Bacillota
GCA
Cys
>WENV183288233
OLSF01040663
189473
Bacillota
GAT
Ile
>WENV183287582
OLSF01002925
291581
Bacillota
CGG
Pro
>WENV183287395
OLSF01001515
291581
Bacillota
CGG
Pro
>WENV183287604
OLSF01003126
175859
Bacillota
TCT
Arg
>WENV183287442
OLSF01001698
175859
Bacillota
TCT
Arg
>WENV183287231
OLSF01000729
175859
Bacillota
TCT
Arg
>WENV183287733
OLSF01004804
398835
Bacillota
GCC
Gly
>WENV183287748
OLSF01005045
290325
Bacillota
GCC
Gly
>WENV183288261
OLSF01047505
175831
Bacillota
ACG
Arg
>WENV183287015
OLSF01000164
332181
Bacillota
TGT
Thr
>WENV183287085
OLSF01000297
187589
Bacillota
CAT
Met
>WENV183287525
OLSF01002385
179810
Bacillota
TCT
Arg
>WENV183287288
OLSF01000965
284627
Bacillota
GAA
Phe
>WENV183287122
OLSF01000363
284627
Bacillota
GAA
Phe
>WENV183287121
OLSF01000361
291634
Bacillota
GAA
Phe
>WENV183287331
OLSF01001169
294020
Bacillota
TAC
Val
>WENV183287023
OLSF01000174
346451
Bacillota
TTT
Lys
>WENV183288306
OLSF01062085
484885
Bacillota
TCC
Gly
>WENV183287889
OLSF01008496
480322
Bacillota
CTG
Gln
>WENV183287679
OLSF01004330
480322
Bacillota
CTG
Gln
>WENV183287581
OLSF01002925
480322
Bacillota
CTG
Gln
>WENV183287394
OLSF01001515
480322
Bacillota
CTG
Gln
>WENV183287860
OLSF01007681
401685
Bacillota
TTG
Gln
>WENV183287998
OLSF01013616
175868
Bacillota
GTT
Asn
>WENV183287904
OLSF01009383
175868
Bacillota
GTT
Asn
>WENV183287666
OLSF01004167
175868
Bacillota
GTT
Asn
>WENV183287609
OLSF01003145
175868
Bacillota
GTT
Asn
>WENV183287388
OLSF01001455
175868
Bacillota
GTT
Asn
>WENV183287376
OLSF01001421
175868
Bacillota
GTT
Asn
>WENV183288187
OLSF01031438
314834
Bacillota
TGC
Ala
>WENV183287519
OLSF01002303
322848
Bacillota
CTT
Lys
>WENV183287997
OLSF01013616
398854
Bacillota
CTC
Glu
>WENV183287608
OLSF01003145
398854
Bacillota
CTC
Glu
>WENV183287387
OLSF01001455
398854
Bacillota
CTC
Glu
>WENV183288127
OLSF01023783
291576
Bacillota
CCC
Gly
>WENV183287326
OLSF01001154
291576
Bacillota
CCC
Gly
>WENV183288009
OLSF01013962
480324
Bacillota
TTG
Gln
>WENV183287531
OLSF01002397
480324
Bacillota
TTG
Gln
>WENV183287508
OLSF01002211
497729
Bacillota
CCA
Trp
>WENV183287464
OLSF01001932
497729
Bacillota
CCA
Trp
>WENV183287131
OLSF01000389
497729
Bacillota
CCA
Trp
>WENV183287316
OLSF01001085
175899
Bacillota
GTC
Asp
>WENV183286916
OLSF01000056
303718
Bacillota
TGT
Thr
>WENV183288251
OLSF01045052
292374
Bacillota
TGC
Ala
>WENV183287737
OLSF01004879
398857
Bacillota
TTC
Glu
>WENV183287969
OLSF01012512
483485
Bacillota
CCC
Gly
>WENV183288122
OLSF01023167
291597
Bacillota
TGC
Ala
>WENV183287650
OLSF01003757
179755
Bacillota
CCG
Arg
>WENV183287712
OLSF01004605
179755
Bacillota
CCG
Arg
>WENV183287938
OLSF01010992
179755
Bacillota
CCG
Arg
>WENV183287972
OLSF01012763
179755
Bacillota
CCG
Arg
>WENV183287283
OLSF01000924
58120
Bacillota
AAG
Leu
>WENV183288012
OLSF01014121
398832
Bacillota
TTC
Glu
>WENV183287641
OLSF01003649
398832
Bacillota
TTC
Glu
>WENV183287579
OLSF01002898
118669
Bacillota
GTA
Tyr
>WENV183287286
OLSF01000965
118669
Bacillota
GTA
Tyr
>WENV183287094
OLSF01000306
118669
Bacillota
GTA
Tyr
>WENV183286873
OLSF01000026
52748
Bacillota
TGA
Ser
>WENV183287256
OLSF01000819
280476
Bacillota
TTT
Lys
>WENV183287479
OLSF01002046
280476
Bacillota
TTT
Lys
>WENV183288250
OLSF01045052
201856
Bacillota
GAT
Ile
>WENV183287018
OLSF01000164
289123
Bacillota
GGT
Thr
>WENV183286847
OLSF01000008
280483
Bacillota
GAA
Phe
>WENV183288114
OLSF01022198
298260
Bacillota
GTT
Asn
>WENV183287859
OLSF01007681
175857
Bacillota
GTG
His
>WENV183287526
OLSF01002385
175857
Bacillota
GTG
His
>WENV183286848
OLSF01000008
285756
Bacillota
GCC
Gly
>WENV183287775
OLSF01005607
398833
Bacillota
TGT
Thr
>WENV183287051
OLSF01000222
398833
Bacillota
TGT
Thr
>WENV183288299
OLSF01060490
280486
Bacillota
TGC
Ala
>WENV183287151
OLSF01000430
405393
Bacillota
GCC
Gly
>WENV183287709
OLSF01004590
56074
Bacillota
TGA
Ser
>WENV183287670
OLSF01004189
56074
Bacillota
TGA
Ser
>WENV183287353
OLSF01001325
56074
Bacillota
TGA
Ser
>WENV183287855
OLSF01007534
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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