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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183293205
OLSK01000087
406043
Verrucomicrobiota
GCA
Cys
>WENV183293315
OLSK01000233
293125
Verrucomicrobiota
GAA
Phe
>WENV183293278
OLSK01000184
406350
Verrucomicrobiota
TGT
Thr
>WENV183293322
OLSK01000245
148006
Verrucomicrobiota
CAA
Leu
>WENV183293915
OLSK01002837
293105
Verrucomicrobiota
CAT
Met
>WENV183293733
OLSK01001600
405901
Verrucomicrobiota
GCC
Gly
>WENV183293622
OLSK01001063
483642
Verrucomicrobiota
CCC
Gly
>WENV183293411
OLSK01000406
157427
Verrucomicrobiota
GTC
Asp
>WENV183293386
OLSK01000354
157427
Verrucomicrobiota
GTC
Asp
>WENV183293279
OLSK01000184
293079
Verrucomicrobiota
CGC
Ala
>WENV183293224
OLSK01000119
120352
Verrucomicrobiota
TAG
Leu
>WENV183293671
OLSK01001322
293069
Verrucomicrobiota
CTT
Lys
>WENV183294263
OLSK01009700
406336
Verrucomicrobiota
CCT
Arg
>WENV183293877
OLSK01002454
406369
Verrucomicrobiota
CCG
Arg
>WENV183293235
OLSK01000132
405940
Verrucomicrobiota
GGT
Thr
>WENV183293602
OLSK01000965
406044
Verrucomicrobiota
CTG
Gln
>WENV183293314
OLSK01000233
187556
Verrucomicrobiota
GGG
Pro
>WENV183293914
OLSK01002837
406037
Verrucomicrobiota
GTG
His
>WENV183293320
OLSK01000240
406360
Verrucomicrobiota
GAC
Val
>WENV183293347
OLSK01000301
187548
Verrucomicrobiota
TCT
Arg
>WENV183293670
OLSK01001322
406040
Verrucomicrobiota
CGT
Thr
>WENV183293497
OLSK01000641
57652
Verrucomicrobiota
TGA
Ser
>WENV183293335
OLSK01000269
406039
Verrucomicrobiota
CAC
Val
>WENV183293819
OLSK01002030
406368
Verrucomicrobiota
TTG
Gln
>WENV183293136
OLSK01000042
101461
Verrucomicrobiota
GTA
Tyr
>WENV183293152
OLSK01000058
293095
Verrucomicrobiota
TTT
Lys
>WENV183293811
OLSK01002020
187561
Verrucomicrobiota
CGG
Pro
>WENV183293663
OLSK01001260
406342
Verrucomicrobiota
CAT
Met
>WENV183293135
OLSK01000042
406351
Verrucomicrobiota
GTT
Asn
>WENV183293312
OLSK01000231
8938
Verrucomicrobiota
GCT
Ser
>WENV183293316
OLSK01000233
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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