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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183306255
OLSX01017753
285360
Bacteroidota
TTT
Lys
>WENV183305085
OLSX01000212
117741
Bacteroidota
TAG
Leu
>WENV183306029
OLSX01008469
398829
Bacteroidota
CCT
Arg
>WENV183305335
OLSX01001013
175838
Bacteroidota
GTT
Asn
>WENV183305748
OLSX01003784
404226
Bacteroidota
CCT
Arg
>WENV183305896
OLSX01005848
175904
Bacteroidota
CGG
Pro
>WENV183305496
OLSX01001762
400161
Bacteroidota
GGT
Thr
>WENV183305088
OLSX01000214
289031
Bacteroidota
CAT
Met
>WENV183305419
OLSX01001401
280557
Bacteroidota
CAT
Met
>WENV183306062
OLSX01009434
20492
Bacteroidota
GGA
Ser
>WENV183305304
OLSX01000834
483416
Bacteroidota
CTG
Gln
>WENV183306363
OLSX01024845
398871
Bacteroidota
TTC
Glu
>WENV183304994
OLSX01000088
201819
Bacteroidota
CAT
Met
>WENV183305891
OLSX01005784
118221
Bacteroidota
CAA
Leu
>WENV183305866
OLSX01005331
118221
Bacteroidota
CAA
Leu
>WENV183305736
OLSX01003652
118221
Bacteroidota
CAA
Leu
>WENV183305471
OLSX01001658
175906
Bacteroidota
GTG
His
>WENV183306339
OLSX01022394
175903
Bacteroidota
GTG
His
>WENV183305309
OLSX01000870
156068
Bacteroidota
TAC
Val
>WENV183305458
OLSX01001612
118089
Bacteroidota
TAG
Leu
>WENV183305631
OLSX01002595
175908
Bacteroidota
GTC
Asp
>WENV183306170
OLSX01014740
178907
Bacteroidota
TCT
Arg
>WENV183304919
OLSX01000024
405877
Bacteroidota
GGT
Thr
>WENV183305558
OLSX01002051
56385
Bacteroidota
TGA
Ser
>WENV183305719
OLSX01003441
20449
Bacteroidota
GGA
Ser
>WENV183306284
OLSX01019677
178133
Bacteroidota
GAT
Ile
>WENV183305172
OLSX01000372
21127
Bacteroidota
GGA
Ser
>WENV183305626
OLSX01002556
175944
Bacteroidota
CAT
Met
>WENV183305569
OLSX01002120
175902
Bacteroidota
GGC
Ala
>WENV183305268
OLSX01000667
480404
Bacteroidota
TTG
Gln
>WENV183306451
OLSX01034720
280451
Bacteroidota
CGT
Thr
>WENV183305666
OLSX01002948
99847
Bacteroidota
GTA
Tyr
>WENV183305581
OLSX01002250
399200
Bacteroidota
CAT
Met
>WENV183306101
OLSX01010906
399200
Bacteroidota
CAT
Met
>WENV183306092
OLSX01010381
186874
Bacteroidota
CAT
Met
>WENV183305772
OLSX01003954
46648
Bacteroidota
TAA
Leu
>WENV183305875
OLSX01005539
178179
Bacteroidota
GGC
Ala
>WENV183306431
OLSX01031958
186108
Bacteroidota
GTT
Asn
>WENV183305585
OLSX01002270
187400
Bacteroidota
GTT
Asn
>WENV183306041
OLSX01008735
73011
Bacteroidota
CAA
Leu
>WENV183306300
OLSX01020315
183889
Bacteroidota
GGC
Ala
>WENV183306471
OLSX01038099
480318
Bacteroidota
CTG
Gln
>WENV183305021
OLSX01000131
178134
Bacteroidota
TGG
Pro
>WENV183305435
OLSX01001471
398828
Bacteroidota
CCG
Arg
>WENV183305729
OLSX01003561
191205
Bacteroidota
TGG
Pro
>WENV183305356
OLSX01001144
159415
Bacteroidota
TAC
Val
>WENV183305910
OLSX01006138
480325
Bacteroidota
CTG
Gln
>WENV183306177
OLSX01014939
176192
Bacteroidota
TCT
Arg
>WENV183304985
OLSX01000072
481328
Bacteroidota
TTG
Gln
>WENV183305121
OLSX01000261
69204
Bacteroidota
TGA
Ser
>WENV183305269
OLSX01000669
280446
Bacteroidota
TTT
Lys
>WENV183305668
OLSX01002965
484496
Bacteroidota
TTG
Gln
>WENV183304848
OLSX01000005
27502
Bacteroidota
GGA
Ser
>WENV183306485
OLSX01041613
285750
Bacteroidota
CCC
Gly
>WENV183306197
OLSX01016039
188555
Bacteroidota
CAT
Met
>WENV183305873
OLSX01005481
117804
Bacteroidota
TAG
Leu
>WENV183305020
OLSX01000131
481045
Bacteroidota
CCC
Gly
>WENV183305824
OLSX01004682
365112
Bacteroidota
TTT
Lys
>WENV183306028
OLSX01008468
398836
Bacteroidota
GCA
Cys
>WENV183305550
OLSX01002008
170323
Bacteroidota
GGG
Pro
>WENV183305490
OLSX01001726
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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