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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183319576
OLVV01004245
406043
Verrucomicrobiota
GCA
Cys
>WENV183319860
OLVV01028582
293125
Verrucomicrobiota
GAA
Phe
>WENV183319859
OLVV01028365
406350
Verrucomicrobiota
TGT
Thr
>WENV183319740
OLVV01012973
148006
Verrucomicrobiota
CAA
Leu
>WENV183319817
OLVV01022328
405901
Verrucomicrobiota
GCC
Gly
>WENV183319796
OLVV01019850
483642
Verrucomicrobiota
CCC
Gly
>WENV183319505
OLVV01002344
101463
Verrucomicrobiota
TAA
Leu
>WENV183319708
OLVV01009708
157427
Verrucomicrobiota
GTC
Asp
>WENV183319768
OLVV01016287
293079
Verrucomicrobiota
CGC
Ala
>WENV183319504
OLVV01002274
120352
Verrucomicrobiota
TAG
Leu
>WENV183319506
OLVV01002344
292636
Verrucomicrobiota
>WENV183319816
OLVV01022196
293069
Verrucomicrobiota
CTT
Lys
>WENV183319966
OLVV01054100
406336
Verrucomicrobiota
CCT
Arg
>WENV183319560
OLVV01003667
406369
Verrucomicrobiota
CCG
Arg
>WENV183319644
OLVV01006388
405940
Verrucomicrobiota
GGT
Thr
>WENV183319933
OLVV01042661
187556
Verrucomicrobiota
GGG
Pro
>WENV183319596
OLVV01004533
406037
Verrucomicrobiota
GTG
His
>WENV183319580
OLVV01004266
406360
Verrucomicrobiota
GAC
Val
>WENV183319524
OLVV01002560
187548
Verrucomicrobiota
TCT
Arg
>WENV183319815
OLVV01022196
406040
Verrucomicrobiota
CGT
Thr
>WENV183319574
OLVV01004203
21159
Verrucomicrobiota
GGA
Ser
>WENV183319667
OLVV01007707
187561
Verrucomicrobiota
CGG
Pro
>WENV183319558
OLVV01003577
406342
Verrucomicrobiota
CAT
Met
>WENV183319614
OLVV01004919
8938
Verrucomicrobiota
GCT
Ser
>WENV183319861
OLVV01028582
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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