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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183323998
OLVY01001807
117741
Bacteroidota
TAG
Leu
>WENV183323471
OLVY01000023
400161
Bacteroidota
GGT
Thr
>WENV183323487
OLVY01000034
280553
Bacteroidota
TTT
Lys
>WENV183324676
OLVY01037477
280557
Bacteroidota
CAT
Met
>WENV183324047
OLVY01002184
20206
Bacteroidota
GGA
Ser
>WENV183324260
OLVY01006407
282712
Bacteroidota
TTT
Lys
>WENV183324873
OLVY01080943
398871
Bacteroidota
TTC
Glu
>WENV183323829
OLVY01000908
118221
Bacteroidota
CAA
Leu
>WENV183324387
OLVY01010438
56493
Bacteroidota
TGA
Ser
>WENV183324534
OLVY01018956
175903
Bacteroidota
GTG
His
>WENV183324094
OLVY01002770
118089
Bacteroidota
TAG
Leu
>WENV183323472
OLVY01000023
283316
Bacteroidota
CCA
Trp
>WENV183323433
OLVY01000004
157895
Bacteroidota
TAC
Val
>WENV183323906
OLVY01001267
405877
Bacteroidota
GGT
Thr
>WENV183323687
OLVY01000417
56385
Bacteroidota
TGA
Ser
>WENV183324252
OLVY01006064
182267
Bacteroidota
GTT
Asn
>WENV183324338
OLVY01008382
20449
Bacteroidota
GGA
Ser
>WENV183324141
OLVY01003566
175886
Bacteroidota
GGC
Ala
>WENV183323975
OLVY01001689
175902
Bacteroidota
GGC
Ala
>WENV183323551
OLVY01000117
179697
Bacteroidota
TGT
Thr
>WENV183324603
OLVY01027273
280451
Bacteroidota
CGT
Thr
>WENV183324486
OLVY01015308
399200
Bacteroidota
CAT
Met
>WENV183323817
OLVY01000855
404109
Bacteroidota
CTC
Glu
>WENV183323868
OLVY01001063
46648
Bacteroidota
TAA
Leu
>WENV183324195
OLVY01004645
280478
Bacteroidota
GCC
Gly
>WENV183324155
OLVY01003763
175844
Bacteroidota
GGC
Ala
>WENV183324594
OLVY01025845
73011
Bacteroidota
CAA
Leu
>WENV183323860
OLVY01001046
187814
Bacteroidota
GTC
Asp
>WENV183323859
OLVY01001046
187814
Bacteroidota
GTC
Asp
>WENV183324445
OLVY01012751
186142
Bacteroidota
GAT
Ile
>WENV183324639
OLVY01032139
74084
Bacteroidota
CAG
Leu
>WENV183323697
OLVY01000425
481328
Bacteroidota
TTG
Gln
>WENV183324435
OLVY01012322
400088
Bacteroidota
GGT
Thr
>WENV183323755
OLVY01000583
484496
Bacteroidota
TTG
Gln
>WENV183324446
OLVY01012751
186143
Bacteroidota
TGC
Ala
>WENV183323976
OLVY01001704
398836
Bacteroidota
GCA
Cys
>WENV183323436
OLVY01000006
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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