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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183331654
OLWC01000537
293125
Verrucomicrobiota
GAA
Phe
>WENV183331954
OLWC01008273
406350
Verrucomicrobiota
TGT
Thr
>WENV183331766
OLWC01001617
148006
Verrucomicrobiota
CAA
Leu
>WENV183331660
OLWC01000589
101600
Verrucomicrobiota
AAG
Leu
>WENV183331825
OLWC01003005
293105
Verrucomicrobiota
CAT
Met
>WENV183331742
OLWC01001155
405901
Verrucomicrobiota
GCC
Gly
>WENV183331729
OLWC01001013
405901
Verrucomicrobiota
GCC
Gly
>WENV183332123
OLWC01026245
483642
Verrucomicrobiota
CCC
Gly
>WENV183331681
OLWC01000685
229220
Verrucomicrobiota
CAT
Met
>WENV183331578
OLWC01000182
101463
Verrucomicrobiota
TAA
Leu
>WENV183331856
OLWC01003706
157427
Verrucomicrobiota
GTC
Asp
>WENV183331771
OLWC01001726
293079
Verrucomicrobiota
CGC
Ala
>WENV183331579
OLWC01000182
292636
Verrucomicrobiota
>WENV183331859
OLWC01003771
298263
Verrucomicrobiota
TTC
Glu
>WENV183331659
OLWC01000588
406336
Verrucomicrobiota
CCT
Arg
>WENV183331907
OLWC01005718
406369
Verrucomicrobiota
CCG
Arg
>WENV183331737
OLWC01001098
405940
Verrucomicrobiota
GGT
Thr
>WENV183331710
OLWC01000837
406044
Verrucomicrobiota
CTG
Gln
>WENV183331736
OLWC01001092
187556
Verrucomicrobiota
GGG
Pro
>WENV183331824
OLWC01003005
406037
Verrucomicrobiota
GTG
His
>WENV183331884
OLWC01004501
406360
Verrucomicrobiota
GAC
Val
>WENV183331854
OLWC01003679
187548
Verrucomicrobiota
TCT
Arg
>WENV183331631
OLWC01000412
406040
Verrucomicrobiota
CGT
Thr
>WENV183331765
OLWC01001583
57652
Verrucomicrobiota
TGA
Ser
>WENV183331658
OLWC01000568
406039
Verrucomicrobiota
CAC
Val
>WENV183331698
OLWC01000735
75458
Verrucomicrobiota
CAG
Leu
>WENV183331785
OLWC01002176
406368
Verrucomicrobiota
TTG
Gln
>WENV183331677
OLWC01000667
21159
Verrucomicrobiota
GGA
Ser
>WENV183331715
OLWC01000870
101461
Verrucomicrobiota
GTA
Tyr
>WENV183331641
OLWC01000500
293095
Verrucomicrobiota
TTT
Lys
>WENV183331719
OLWC01000914
187561
Verrucomicrobiota
CGG
Pro
>WENV183331682
OLWC01000692
406342
Verrucomicrobiota
CAT
Met
>WENV183331632
OLWC01000420
406351
Verrucomicrobiota
GTT
Asn
>WENV183331662
OLWC01000597
303305
Verrucomicrobiota
GGC
Ala
>WENV183332122
OLWC01026245
507474
Verrucomicrobiota
TCC
Gly
>WENV183331758
OLWC01001510
406346
Verrucomicrobiota
TAC
Val
>WENV183331651
OLWC01000528
8938
Verrucomicrobiota
GCT
Ser
>WENV183331655
OLWC01000537
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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