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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183341477
OLWM01024003
406043
Verrucomicrobiota
GCA
Cys
>WENV183341363
OLWM01008443
148006
Verrucomicrobiota
CAA
Leu
>WENV183341248
OLWM01002344
293105
Verrucomicrobiota
CAT
Met
>WENV183341405
OLWM01012596
405901
Verrucomicrobiota
GCC
Gly
>WENV183341367
OLWM01008529
229220
Verrucomicrobiota
CAT
Met
>WENV183341299
OLWM01003742
101463
Verrucomicrobiota
TAA
Leu
>WENV183341508
OLWM01031984
293079
Verrucomicrobiota
CGC
Ala
>WENV183341364
OLWM01008478
120352
Verrucomicrobiota
TAG
Leu
>WENV183341300
OLWM01003742
292636
Verrucomicrobiota
>WENV183341478
OLWM01024003
298263
Verrucomicrobiota
TTC
Glu
>WENV183341439
OLWM01017646
406336
Verrucomicrobiota
CCT
Arg
>WENV183341340
OLWM01007083
406369
Verrucomicrobiota
CCG
Arg
>WENV183341406
OLWM01012602
406037
Verrucomicrobiota
GTG
His
>WENV183341341
OLWM01007136
187548
Verrucomicrobiota
TCT
Arg
>WENV183341515
OLWM01033680
406039
Verrucomicrobiota
CAC
Val
>WENV183341504
OLWM01030204
21159
Verrucomicrobiota
GGA
Ser
>WENV183341326
OLWM01006074
293095
Verrucomicrobiota
TTT
Lys
>WENV183341468
OLWM01021413
406342
Verrucomicrobiota
CAT
Met
>WENV183341494
OLWM01027327
406351
Verrucomicrobiota
GTT
Asn
>WENV183341492
OLWM01026958
303305
Verrucomicrobiota
GGC
Ala
>WENV183341461
OLWM01020955
406346
Verrucomicrobiota
TAC
Val
>WENV183341430
OLWM01016552
8938
Verrucomicrobiota
GCT
Ser
>WENV183341501
OLWM01029857
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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