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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183348974
OLWV01008523
99852
Bacillota
GTA
Tyr
>WENV183349027
OLWV01013263
405363
Bacillota
GCA
Cys
>WENV183348995
OLWV01009997
175842
Bacillota
CAC
Val
>WENV183348926
OLWV01005215
179563
Bacillota
GAT
Ile
>WENV183349017
OLWV01012269
280447
Bacillota
GAC
Val
>WENV183348904
OLWV01004167
175825
Bacillota
GAT
Ile
>WENV183348887
OLWV01003613
73009
Bacillota
CAG
Leu
>WENV183348883
OLWV01003381
189473
Bacillota
GAT
Ile
>WENV183348936
OLWV01005934
175831
Bacillota
ACG
Arg
>WENV183348925
OLWV01005215
353153
Bacillota
TGC
Ala
>WENV183349006
OLWV01011185
398854
Bacillota
CTC
Glu
>WENV183349121
OLWV01035200
291576
Bacillota
CCC
Gly
>WENV183348864
OLWV01002440
497729
Bacillota
CCA
Trp
>WENV183348788
OLWV01000736
303718
Bacillota
TGT
Thr
>WENV183348898
OLWV01003966
323864
Bacillota
TGC
Ala
>WENV183349127
OLWV01036086
46655
Bacillota
TGA
Ser
>WENV183349001
OLWV01010520
280444
Bacillota
GGT
Thr
>WENV183349097
OLWV01028997
179755
Bacillota
CCG
Arg
>WENV183348637
OLWV01000114
175915
Bacillota
GTC
Asp
>WENV183349083
OLWV01026812
280476
Bacillota
TTT
Lys
>WENV183349108
OLWV01030850
309916
Bacillota
TTT
Lys
>WENV183348634
OLWV01000114
118359
Bacillota
GTA
Tyr
>WENV183349046
OLWV01016999
281271
Bacillota
TGC
Ala
>WENV183349073
OLWV01024167
398833
Bacillota
TGT
Thr
>WENV183349000
OLWV01010520
175849
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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