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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183351696
OLWZ01000203
117741
Bacteroidota
TAG
Leu
>WENV183351972
OLWZ01001764
398829
Bacteroidota
CCT
Arg
>WENV183351731
OLWZ01000274
175838
Bacteroidota
GTT
Asn
>WENV183352562
OLWZ01044486
404226
Bacteroidota
CCT
Arg
>WENV183352319
OLWZ01013595
175904
Bacteroidota
CGG
Pro
>WENV183352314
OLWZ01013396
289031
Bacteroidota
CAT
Met
>WENV183351626
OLWZ01000086
280557
Bacteroidota
CAT
Met
>WENV183351587
OLWZ01000022
20206
Bacteroidota
GGA
Ser
>WENV183351824
OLWZ01000646
398871
Bacteroidota
TTC
Glu
>WENV183351603
OLWZ01000043
56493
Bacteroidota
TGA
Ser
>WENV183352145
OLWZ01005473
175906
Bacteroidota
GTG
His
>WENV183351604
OLWZ01000043
175903
Bacteroidota
GTG
His
>WENV183351922
OLWZ01001203
118089
Bacteroidota
TAG
Leu
>WENV183351843
OLWZ01000753
175908
Bacteroidota
GTC
Asp
>WENV183352320
OLWZ01013595
280530
Bacteroidota
CCA
Trp
>WENV183351940
OLWZ01001369
178907
Bacteroidota
TCT
Arg
>WENV183352139
OLWZ01005361
20449
Bacteroidota
GGA
Ser
>WENV183351667
OLWZ01000156
56072
Bacteroidota
TAA
Leu
>WENV183351614
OLWZ01000058
57807
Bacteroidota
TGA
Ser
>WENV183351713
OLWZ01000239
175902
Bacteroidota
GGC
Ala
>WENV183351947
OLWZ01001474
280451
Bacteroidota
CGT
Thr
>WENV183351863
OLWZ01000836
99847
Bacteroidota
GTA
Tyr
>WENV183352373
OLWZ01016885
399200
Bacteroidota
CAT
Met
>WENV183352005
OLWZ01002370
404109
Bacteroidota
CTC
Glu
>WENV183352195
OLWZ01006816
186874
Bacteroidota
CAT
Met
>WENV183352396
OLWZ01019159
46648
Bacteroidota
TAA
Leu
>WENV183352014
OLWZ01002414
280478
Bacteroidota
GCC
Gly
>WENV183351935
OLWZ01001321
280478
Bacteroidota
GCC
Gly
>WENV183352607
OLWZ01056236
186108
Bacteroidota
GTT
Asn
>WENV183352329
OLWZ01014110
175844
Bacteroidota
GGC
Ala
>WENV183352197
OLWZ01007007
73011
Bacteroidota
CAA
Leu
>WENV183352512
OLWZ01034601
183889
Bacteroidota
GGC
Ala
>WENV183351828
OLWZ01000652
480318
Bacteroidota
CTG
Gln
>WENV183352553
OLWZ01041492
186142
Bacteroidota
GAT
Ile
>WENV183351608
OLWZ01000052
398828
Bacteroidota
CCG
Arg
>WENV183352158
OLWZ01005765
74084
Bacteroidota
CAG
Leu
>WENV183352249
OLWZ01008995
480325
Bacteroidota
CTG
Gln
>WENV183352303
OLWZ01012458
176192
Bacteroidota
TCT
Arg
>WENV183351644
OLWZ01000123
176192
Bacteroidota
TCT
Arg
>WENV183352596
OLWZ01053931
481328
Bacteroidota
TTG
Gln
>WENV183351946
OLWZ01001447
400088
Bacteroidota
GGT
Thr
>WENV183351732
OLWZ01000277
280446
Bacteroidota
TTT
Lys
>WENV183351563
OLWZ01000005
280446
Bacteroidota
TTT
Lys
>WENV183352167
OLWZ01005980
484496
Bacteroidota
TTG
Gln
>WENV183351637
OLWZ01000098
484496
Bacteroidota
TTG
Gln
>WENV183352257
OLWZ01009353
398836
Bacteroidota
GCA
Cys
>WENV183351870
OLWZ01000861
398836
Bacteroidota
GCA
Cys
>WENV183351847
OLWZ01000772
398836
Bacteroidota
GCA
Cys
>WENV183352211
OLWZ01007458
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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