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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183353141
OLXA01016520
406043
Verrucomicrobiota
GCA
Cys
>WENV183353166
OLXA01020856
293125
Verrucomicrobiota
GAA
Phe
>WENV183353183
OLXA01023277
406350
Verrucomicrobiota
TGT
Thr
>WENV183353023
OLXA01005952
405901
Verrucomicrobiota
GCC
Gly
>WENV183353068
OLXA01008786
229220
Verrucomicrobiota
CAT
Met
>WENV183352988
OLXA01003562
101463
Verrucomicrobiota
TAA
Leu
>WENV183353074
OLXA01009194
157427
Verrucomicrobiota
GTC
Asp
>WENV183353236
OLXA01036629
293079
Verrucomicrobiota
CGC
Ala
>WENV183353145
OLXA01017056
120352
Verrucomicrobiota
TAG
Leu
>WENV183352989
OLXA01003562
292636
Verrucomicrobiota
>WENV183353142
OLXA01016520
298263
Verrucomicrobiota
TTC
Glu
>WENV183353101
OLXA01011037
293069
Verrucomicrobiota
CTT
Lys
>WENV183353100
OLXA01011037
293069
Verrucomicrobiota
CTT
Lys
>WENV183353231
OLXA01034566
405940
Verrucomicrobiota
GGT
Thr
>WENV183353125
OLXA01014162
187556
Verrucomicrobiota
GGG
Pro
>WENV183353099
OLXA01011037
406040
Verrucomicrobiota
CGT
Thr
>WENV183353117
OLXA01012863
57652
Verrucomicrobiota
TGA
Ser
>WENV183353093
OLXA01010369
406039
Verrucomicrobiota
CAC
Val
>WENV183353129
OLXA01014417
406368
Verrucomicrobiota
TTG
Gln
>WENV183353052
OLXA01007642
21159
Verrucomicrobiota
GGA
Ser
>WENV183353199
OLXA01027985
101461
Verrucomicrobiota
GTA
Tyr
>WENV183353040
OLXA01006759
187561
Verrucomicrobiota
CGG
Pro
>WENV183353128
OLXA01014382
406351
Verrucomicrobiota
GTT
Asn
>WENV183353075
OLXA01009204
303305
Verrucomicrobiota
GGC
Ala
>WENV183353049
OLXA01007374
8938
Verrucomicrobiota
GCT
Ser
>WENV183353167
OLXA01020856
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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