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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183354594
OLXC01002738
406043
Verrucomicrobiota
GCA
Cys
>WENV183354331
OLXC01000003
293125
Verrucomicrobiota
GAA
Phe
>WENV183354345
OLXC01000019
406350
Verrucomicrobiota
TGT
Thr
>WENV183354391
OLXC01000134
148006
Verrucomicrobiota
CAA
Leu
>WENV183354381
OLXC01000104
101600
Verrucomicrobiota
AAG
Leu
>WENV183354698
OLXC01005038
293105
Verrucomicrobiota
CAT
Met
>WENV183354526
OLXC01001554
405901
Verrucomicrobiota
GCC
Gly
>WENV183354520
OLXC01001426
483642
Verrucomicrobiota
CCC
Gly
>WENV183354401
OLXC01000196
229220
Verrucomicrobiota
CAT
Met
>WENV183354344
OLXC01000018
8960
Verrucomicrobiota
CGA
Ser
>WENV183354727
OLXC01007093
101463
Verrucomicrobiota
TAA
Leu
>WENV183354393
OLXC01000150
157427
Verrucomicrobiota
GTC
Asp
>WENV183354364
OLXC01000069
157427
Verrucomicrobiota
GTC
Asp
>WENV183354346
OLXC01000019
293079
Verrucomicrobiota
CGC
Ala
>WENV183354400
OLXC01000193
120352
Verrucomicrobiota
TAG
Leu
>WENV183354813
OLXC01010771
292636
Verrucomicrobiota
>WENV183354531
OLXC01001587
298263
Verrucomicrobiota
TTC
Glu
>WENV183354472
OLXC01000714
298263
Verrucomicrobiota
TTC
Glu
>WENV183354413
OLXC01000263
298263
Verrucomicrobiota
TTC
Glu
>WENV183354358
OLXC01000057
293069
Verrucomicrobiota
CTT
Lys
>WENV183354338
OLXC01000013
406336
Verrucomicrobiota
CCT
Arg
>WENV183354425
OLXC01000332
406369
Verrucomicrobiota
CCG
Arg
>WENV183354380
OLXC01000096
405940
Verrucomicrobiota
GGT
Thr
>WENV183354479
OLXC01000899
406044
Verrucomicrobiota
CTG
Gln
>WENV183354330
OLXC01000003
187556
Verrucomicrobiota
GGG
Pro
>WENV183354697
OLXC01005038
406037
Verrucomicrobiota
GTG
His
>WENV183354423
OLXC01000306
406360
Verrucomicrobiota
GAC
Val
>WENV183354333
OLXC01000004
187548
Verrucomicrobiota
TCT
Arg
>WENV183354357
OLXC01000057
406040
Verrucomicrobiota
CGT
Thr
>WENV183354441
OLXC01000450
57652
Verrucomicrobiota
TGA
Ser
>WENV183354334
OLXC01000007
406039
Verrucomicrobiota
CAC
Val
>WENV183354362
OLXC01000067
75458
Verrucomicrobiota
CAG
Leu
>WENV183354343
OLXC01000017
406368
Verrucomicrobiota
TTG
Gln
>WENV183354512
OLXC01001331
21159
Verrucomicrobiota
GGA
Ser
>WENV183354437
OLXC01000436
101461
Verrucomicrobiota
GTA
Tyr
>WENV183354355
OLXC01000053
293095
Verrucomicrobiota
TTT
Lys
>WENV183354596
OLXC01002746
187561
Verrucomicrobiota
CGG
Pro
>WENV183354352
OLXC01000042
406351
Verrucomicrobiota
GTT
Asn
>WENV183354519
OLXC01001426
507474
Verrucomicrobiota
TCC
Gly
>WENV183354349
OLXC01000027
406346
Verrucomicrobiota
TAC
Val
>WENV183354896
OLXC01018207
8938
Verrucomicrobiota
GCT
Ser
>WENV183354332
OLXC01000003
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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