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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183356061
OLXE01000211
117741
Bacteroidota
TAG
Leu
>WENV183356005
OLXE01000057
398829
Bacteroidota
CCT
Arg
>WENV183356029
OLXE01000104
175838
Bacteroidota
GTT
Asn
>WENV183356153
OLXE01000552
404226
Bacteroidota
CCT
Arg
>WENV183355909
OLXE01000001
289031
Bacteroidota
CAT
Met
>WENV183355950
OLXE01000019
280553
Bacteroidota
TTT
Lys
>WENV183356198
OLXE01000920
280557
Bacteroidota
CAT
Met
>WENV183356150
OLXE01000543
20492
Bacteroidota
GGA
Ser
>WENV183356079
OLXE01000273
20206
Bacteroidota
GGA
Ser
>WENV183355925
OLXE01000005
483416
Bacteroidota
CTG
Gln
>WENV183356078
OLXE01000264
56493
Bacteroidota
TGA
Ser
>WENV183356059
OLXE01000205
175903
Bacteroidota
GTG
His
>WENV183356445
OLXE01009522
291612
Bacteroidota
>WENV183356519
OLXE01017768
156068
Bacteroidota
TAC
Val
>WENV183356352
OLXE01004721
118089
Bacteroidota
TAG
Leu
>WENV183356328
OLXE01003931
203954
Bacteroidota
GTC
Asp
>WENV183356579
OLXE01032945
178907
Bacteroidota
TCT
Arg
>WENV183355919
OLXE01000003
405877
Bacteroidota
GGT
Thr
>WENV183356073
OLXE01000246
29791
Bacteroidota
GCT
Ser
>WENV183356499
OLXE01015368
20449
Bacteroidota
GGA
Ser
>WENV183356418
OLXE01007861
178133
Bacteroidota
GAT
Ile
>WENV183355931
OLXE01000010
21127
Bacteroidota
GGA
Ser
>WENV183356156
OLXE01000596
57807
Bacteroidota
TGA
Ser
>WENV183355955
OLXE01000021
175902
Bacteroidota
GGC
Ala
>WENV183356074
OLXE01000246
398860
Bacteroidota
CTC
Glu
>WENV183356102
OLXE01000352
280451
Bacteroidota
CGT
Thr
>WENV183356132
OLXE01000434
418894
Bacteroidota
TTC
Glu
>WENV183356134
OLXE01000446
99847
Bacteroidota
GTA
Tyr
>WENV183355986
OLXE01000034
99847
Bacteroidota
GTA
Tyr
>WENV183356361
OLXE01005342
399200
Bacteroidota
CAT
Met
>WENV183355916
OLXE01000001
186874
Bacteroidota
CAT
Met
>WENV183356081
OLXE01000288
488746
Bacteroidota
CTG
Gln
>WENV183356337
OLXE01004157
186108
Bacteroidota
GTT
Asn
>WENV183356056
OLXE01000190
187400
Bacteroidota
GTT
Asn
>WENV183356249
OLXE01001750
175844
Bacteroidota
GGC
Ala
>WENV183356323
OLXE01003654
480318
Bacteroidota
CTG
Gln
>WENV183356149
OLXE01000534
158068
Bacteroidota
GGG
Pro
>WENV183356046
OLXE01000154
158068
Bacteroidota
GGG
Pro
>WENV183355921
OLXE01000003
158068
Bacteroidota
GGG
Pro
>WENV183356416
OLXE01007822
186142
Bacteroidota
GAT
Ile
>WENV183356035
OLXE01000119
398828
Bacteroidota
CCG
Arg
>WENV183356449
OLXE01009687
74084
Bacteroidota
CAG
Leu
>WENV183356264
OLXE01002008
159415
Bacteroidota
TAC
Val
>WENV183356013
OLXE01000073
140771
Bacteroidota
>WENV183356210
OLXE01001028
176192
Bacteroidota
TCT
Arg
>WENV183356054
OLXE01000187
280446
Bacteroidota
TTT
Lys
>WENV183356006
OLXE01000063
280446
Bacteroidota
TTT
Lys
>WENV183356142
OLXE01000495
484496
Bacteroidota
TTG
Gln
>WENV183356082
OLXE01000294
484496
Bacteroidota
TTG
Gln
>WENV183356022
OLXE01000085
484496
Bacteroidota
TTG
Gln
>WENV183356545
OLXE01021836
285750
Bacteroidota
CCC
Gly
>WENV183356315
OLXE01003463
398836
Bacteroidota
GCA
Cys
>WENV183356120
OLXE01000409
398836
Bacteroidota
GCA
Cys
>WENV183356096
OLXE01000327
398836
Bacteroidota
GCA
Cys
>WENV183356037
OLXE01000128
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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