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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183363451
OLXL01003334
343590
Bacillota
GCC
Gly
>WENV183363345
OLXL01001220
405363
Bacillota
GCA
Cys
>WENV183363644
OLXL01011810
290391
Bacillota
TAC
Val
>WENV183363531
OLXL01006035
280428
Bacillota
GAA
Phe
>WENV183363840
OLXL01035918
280492
Bacillota
CTT
Lys
>WENV183363474
OLXL01004185
175842
Bacillota
CAC
Val
>WENV183363548
OLXL01007432
236579
Bacillota
GAT
Ile
>WENV183363923
OLXL01055398
291553
Bacillota
GAA
Phe
>WENV183363547
OLXL01007432
295166
Bacillota
TGC
Ala
>WENV183363417
OLXL01002379
190476
Bacillota
CAT
Met
>WENV183363328
OLXL01000951
190476
Bacillota
CAT
Met
>WENV183363594
OLXL01009496
73664
Bacillota
CAG
Leu
>WENV183363445
OLXL01003226
280447
Bacillota
GAC
Val
>WENV183363403
OLXL01002005
5692
Bacillota
GCT
Ser
>WENV183363576
OLXL01008905
175825
Bacillota
GAT
Ile
>WENV183363217
OLXL01000184
73009
Bacillota
CAG
Leu
>WENV183363494
OLXL01004458
189473
Bacillota
GAT
Ile
>WENV183363487
OLXL01004304
291581
Bacillota
CGG
Pro
>WENV183363378
OLXL01001585
175859
Bacillota
TCT
Arg
>WENV183363469
OLXL01004133
175831
Bacillota
ACG
Arg
>WENV183363657
OLXL01012148
137739
Bacillota
TAG
Leu
>WENV183363486
OLXL01004304
480322
Bacillota
CTG
Gln
>WENV183363300
OLXL01000687
175868
Bacillota
GTT
Asn
>WENV183363253
OLXL01000346
175868
Bacillota
GTT
Asn
>WENV183363299
OLXL01000687
398854
Bacillota
CTC
Glu
>WENV183363322
OLXL01000913
291576
Bacillota
CCC
Gly
>WENV183363344
OLXL01001214
480324
Bacillota
TTG
Gln
>WENV183363861
OLXL01038813
175899
Bacillota
GTC
Asp
>WENV183363427
OLXL01002635
303718
Bacillota
TGT
Thr
>WENV183363220
OLXL01000184
280444
Bacillota
GGT
Thr
>WENV183363686
OLXL01015209
483485
Bacillota
CCC
Gly
>WENV183363570
OLXL01008756
179755
Bacillota
CCG
Arg
>WENV183363340
OLXL01001071
179755
Bacillota
CCG
Arg
>WENV183363922
OLXL01055398
280547
Bacillota
GTC
Asp
>WENV183363981
OLXL01069173
46835
Bacillota
TAA
Leu
>WENV183363418
OLXL01002379
398832
Bacillota
TTC
Glu
>WENV183363329
OLXL01000951
398832
Bacillota
TTC
Glu
>WENV183363539
OLXL01006584
118669
Bacillota
GTA
Tyr
>WENV183363647
OLXL01011810
285756
Bacillota
GCC
Gly
>WENV183363337
OLXL01001023
398833
Bacillota
TGT
Thr
>WENV183363219
OLXL01000184
175849
Bacillota
GTC
Asp
>WENV183363402
OLXL01002005
56074
Bacillota
TGA
Ser
>WENV183363273
OLXL01000510
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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