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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183383622
OLYM01017913
285746
Actinomycetota
GGC
Ala
>WENV183383251
OLYM01001015
280498
Actinomycetota
GTT
Asn
>WENV183383119
OLYM01000137
280503
Actinomycetota
CCT
Arg
>WENV183383214
OLYM01000685
140768
Actinomycetota
TAG
Leu
>WENV183383502
OLYM01008310
176078
Actinomycetota
GGG
Pro
>WENV183383604
OLYM01015416
175837
Actinomycetota
ACG
Arg
>WENV183383100
OLYM01000067
280441
Actinomycetota
CCG
Arg
>WENV183383678
OLYM01030172
176077
Actinomycetota
CAT
Met
>WENV183383675
OLYM01029786
221022
Actinomycetota
CAT
Met
>WENV183383698
OLYM01036484
484283
Actinomycetota
CTG
Gln
>WENV183383469
OLYM01007062
280524
Actinomycetota
TGC
Ala
>WENV183383363
OLYM01002855
291585
Actinomycetota
GCC
Gly
>WENV183383357
OLYM01002774
280523
Actinomycetota
GGC
Ala
>WENV183383168
OLYM01000379
175841
Actinomycetota
TAT
Ile
>WENV183383199
OLYM01000555
280536
Actinomycetota
CTT
Lys
>WENV183383650
OLYM01023616
175872
Actinomycetota
GTC
Asp
>WENV183383233
OLYM01000802
20205
Actinomycetota
GCT
Ser
>WENV183383427
OLYM01005038
280450
Actinomycetota
TTT
Lys
>WENV183383220
OLYM01000704
480329
Actinomycetota
CCC
Gly
>WENV183383235
OLYM01000827
483206
Actinomycetota
CTG
Gln
>WENV183383428
OLYM01005095
20209
Actinomycetota
GAG
Leu
>WENV183383580
OLYM01012810
480319
Actinomycetota
TTG
Gln
>WENV183383409
OLYM01004406
280489
Actinomycetota
CTC
Glu
>WENV183383410
OLYM01004406
398853
Actinomycetota
CTG
Gln
>WENV183383368
OLYM01002965
203883
Actinomycetota
TCT
Arg
>WENV183383231
OLYM01000778
46642
Actinomycetota
CGA
Ser
>WENV183383250
OLYM01000997
104211
Actinomycetota
CAG
Leu
>WENV183383733
OLYM01057500
117903
Actinomycetota
GTA
Tyr
>WENV183383262
OLYM01001232
56071
Actinomycetota
TGA
Ser
>WENV183383194
OLYM01000522
147796
Actinomycetota
TAA
Leu
>WENV183383213
OLYM01000685
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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