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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183388708
OLZA01000352
117741
Bacteroidota
TAG
Leu
>WENV183388756
OLZA01000560
398829
Bacteroidota
CCT
Arg
>WENV183388610
OLZA01000169
175838
Bacteroidota
GTT
Asn
>WENV183388537
OLZA01000086
404226
Bacteroidota
CCT
Arg
>WENV183388552
OLZA01000106
175904
Bacteroidota
CGG
Pro
>WENV183388636
OLZA01000213
400161
Bacteroidota
GGT
Thr
>WENV183388646
OLZA01000226
289031
Bacteroidota
CAT
Met
>WENV183388481
OLZA01000027
289031
Bacteroidota
CAT
Met
>WENV183388726
OLZA01000441
156422
Bacteroidota
TAC
Val
>WENV183388822
OLZA01000986
280557
Bacteroidota
CAT
Met
>WENV183388684
OLZA01000297
20206
Bacteroidota
GGA
Ser
>WENV183388671
OLZA01000289
483416
Bacteroidota
CTG
Gln
>WENV183388454
OLZA01000020
483416
Bacteroidota
CTG
Gln
>WENV183388536
OLZA01000086
398871
Bacteroidota
TTC
Glu
>WENV183388589
OLZA01000145
284237
Bacteroidota
TTT
Lys
>WENV183388799
OLZA01000808
56493
Bacteroidota
TGA
Ser
>WENV183388503
OLZA01000044
175906
Bacteroidota
GTG
His
>WENV183388612
OLZA01000174
175903
Bacteroidota
GTG
His
>WENV183389380
OLZA01043816
351598
Bacteroidota
CGG
Pro
>WENV183388650
OLZA01000236
118089
Bacteroidota
TAG
Leu
>WENV183388553
OLZA01000106
280530
Bacteroidota
CCA
Trp
>WENV183388618
OLZA01000186
157895
Bacteroidota
TAC
Val
>WENV183388652
OLZA01000246
178907
Bacteroidota
TCT
Arg
>WENV183388587
OLZA01000141
405877
Bacteroidota
GGT
Thr
>WENV183388718
OLZA01000408
56385
Bacteroidota
TGA
Ser
>WENV183388513
OLZA01000053
57645
Bacteroidota
TGA
Ser
>WENV183389012
OLZA01004109
182267
Bacteroidota
GTT
Asn
>WENV183388685
OLZA01000299
20449
Bacteroidota
GGA
Ser
>WENV183388642
OLZA01000220
21127
Bacteroidota
GGA
Ser
>WENV183389208
OLZA01013116
175886
Bacteroidota
GGC
Ala
>WENV183388509
OLZA01000049
175902
Bacteroidota
GGC
Ala
>WENV183388807
OLZA01000877
280451
Bacteroidota
CGT
Thr
>WENV183388808
OLZA01000879
99847
Bacteroidota
GTA
Tyr
>WENV183388737
OLZA01000489
399200
Bacteroidota
CAT
Met
>WENV183388444
OLZA01000012
404109
Bacteroidota
CTC
Glu
>WENV183389212
OLZA01013413
186874
Bacteroidota
CAT
Met
>WENV183388836
OLZA01001105
46648
Bacteroidota
TAA
Leu
>WENV183388674
OLZA01000295
488746
Bacteroidota
CTG
Gln
>WENV183388655
OLZA01000253
280478
Bacteroidota
GCC
Gly
>WENV183388701
OLZA01000335
187400
Bacteroidota
GTT
Asn
>WENV183388649
OLZA01000235
73011
Bacteroidota
CAA
Leu
>WENV183389199
OLZA01012800
280515
Bacteroidota
CCA
Trp
>WENV183388445
OLZA01000012
178134
Bacteroidota
TGG
Pro
>WENV183388778
OLZA01000720
158068
Bacteroidota
GGG
Pro
>WENV183388633
OLZA01000205
398828
Bacteroidota
CCG
Arg
>WENV183389308
OLZA01025649
176817
Bacteroidota
CAT
Met
>WENV183388550
OLZA01000106
74084
Bacteroidota
CAG
Leu
>WENV183388500
OLZA01000042
480325
Bacteroidota
CTG
Gln
>WENV183388498
OLZA01000034
481328
Bacteroidota
TTG
Gln
>WENV183389359
OLZA01034623
400088
Bacteroidota
GGT
Thr
>WENV183388748
OLZA01000526
69204
Bacteroidota
TGA
Ser
>WENV183388504
OLZA01000045
280446
Bacteroidota
TTT
Lys
>WENV183388694
OLZA01000313
484496
Bacteroidota
TTG
Gln
>WENV183388784
OLZA01000775
27502
Bacteroidota
GGA
Ser
>WENV183388776
OLZA01000707
285750
Bacteroidota
CCC
Gly
>WENV183389177
OLZA01011657
373714
Bacteroidota
GCC
Gly
>WENV183389191
OLZA01012444
188555
Bacteroidota
CAT
Met
>WENV183388525
OLZA01000067
365112
Bacteroidota
TTT
Lys
>WENV183388907
OLZA01001772
398836
Bacteroidota
GCA
Cys
>WENV183388722
OLZA01000430
170323
Bacteroidota
GGG
Pro
>WENV183388651
OLZA01000241
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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