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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183390801
OLZC01003533
99852
Bacillota
GTA
Tyr
>WENV183390939
OLZC01008566
212982
Bacillota
ACG
Arg
>WENV183391004
OLZC01015110
405363
Bacillota
GCA
Cys
>WENV183390724
OLZC01001599
280492
Bacillota
CTT
Lys
>WENV183390758
OLZC01002283
175842
Bacillota
CAC
Val
>WENV183390961
OLZC01010535
141334
Bacillota
TAG
Leu
>WENV183390767
OLZC01002493
190476
Bacillota
CAT
Met
>WENV183390687
OLZC01000782
73664
Bacillota
CAG
Leu
>WENV183390860
OLZC01005617
280447
Bacillota
GAC
Val
>WENV183390786
OLZC01002897
5692
Bacillota
GCT
Ser
>WENV183390713
OLZC01001333
73009
Bacillota
CAG
Leu
>WENV183390708
OLZC01001166
73009
Bacillota
CAG
Leu
>WENV183390960
OLZC01010535
283502
Bacillota
TTT
Lys
>WENV183390664
OLZC01000523
291581
Bacillota
CGG
Pro
>WENV183390915
OLZC01007582
175859
Bacillota
TCT
Arg
>WENV183391028
OLZC01017905
280436
Bacillota
TGC
Ala
>WENV183390793
OLZC01003244
175831
Bacillota
ACG
Arg
>WENV183390958
OLZC01010535
281302
Bacillota
GTG
His
>WENV183390663
OLZC01000523
480322
Bacillota
CTG
Gln
>WENV183390705
OLZC01001107
480322
Bacillota
CTG
Gln
>WENV183390761
OLZC01002416
175868
Bacillota
GTT
Asn
>WENV183390730
OLZC01001720
291576
Bacillota
CCC
Gly
>WENV183390710
OLZC01001217
303718
Bacillota
TGT
Thr
>WENV183390772
OLZC01002662
56079
Bacillota
AAG
Leu
>WENV183390957
OLZC01010535
182384
Bacillota
TCT
Arg
>WENV183391036
OLZC01018376
186051
Bacillota
GAT
Ile
>WENV183390733
OLZC01001774
117745
Bacillota
GTA
Tyr
>WENV183390696
OLZC01000881
280444
Bacillota
GGT
Thr
>WENV183390741
OLZC01001938
46643
Bacillota
TGA
Ser
>WENV183390791
OLZC01003127
179755
Bacillota
CCG
Arg
>WENV183390784
OLZC01002873
398832
Bacillota
TTC
Glu
>WENV183390979
OLZC01012768
282755
Bacillota
GGT
Thr
>WENV183390735
OLZC01001774
280462
Bacillota
GAA
Phe
>WENV183390588
OLZC01000172
398852
Bacillota
CTC
Glu
>WENV183390815
OLZC01003873
280483
Bacillota
GAA
Phe
>WENV183390773
OLZC01002686
406186
Bacillota
CTC
Glu
>WENV183390816
OLZC01003873
285756
Bacillota
GCC
Gly
>WENV183390695
OLZC01000881
175849
Bacillota
GTC
Asp
>WENV183390893
OLZC01007026
317820
Bacillota
TAC
Val
>WENV183390982
OLZC01013278
405393
Bacillota
GCC
Gly
>WENV183390785
OLZC01002897
56074
Bacillota
TGA
Ser
>WENV183390711
OLZC01001222
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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