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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183391304
OLZD01000551
280492
Bacillota
CTT
Lys
>WENV183391804
OLZD01032378
175842
Bacillota
CAC
Val
>WENV183391594
OLZD01007412
291629
Bacillota
CCA
Trp
>WENV183391710
OLZD01015666
236579
Bacillota
GAT
Ile
>WENV183391709
OLZD01015666
295166
Bacillota
TGC
Ala
>WENV183391615
OLZD01008504
190476
Bacillota
CAT
Met
>WENV183391234
OLZD01000161
73664
Bacillota
CAG
Leu
>WENV183391521
OLZD01004277
312274
Bacillota
GGC
Ala
>WENV183391604
OLZD01008115
73009
Bacillota
CAG
Leu
>WENV183391694
OLZD01014448
291581
Bacillota
CGG
Pro
>WENV183391823
OLZD01037816
398835
Bacillota
GCC
Gly
>WENV183391415
OLZD01002042
290325
Bacillota
GCC
Gly
>WENV183391610
OLZD01008482
332181
Bacillota
TGT
Thr
>WENV183391208
OLZD01000041
179810
Bacillota
TCT
Arg
>WENV183391359
OLZD01001292
291634
Bacillota
GAA
Phe
>WENV183391817
OLZD01036977
346451
Bacillota
TTT
Lys
>WENV183391693
OLZD01014448
480322
Bacillota
CTG
Gln
>WENV183391796
OLZD01029264
175868
Bacillota
GTT
Asn
>WENV183391795
OLZD01029264
398854
Bacillota
CTC
Glu
>WENV183391726
OLZD01017876
291576
Bacillota
CCC
Gly
>WENV183391578
OLZD01006421
303718
Bacillota
TGT
Thr
>WENV183391393
OLZD01001613
56079
Bacillota
AAG
Leu
>WENV183391569
OLZD01006113
323864
Bacillota
TGC
Ala
>WENV183391238
OLZD01000162
117745
Bacillota
GTA
Tyr
>WENV183391222
OLZD01000095
46643
Bacillota
TGA
Ser
>WENV183391397
OLZD01001696
179755
Bacillota
CCG
Arg
>WENV183391616
OLZD01008504
398832
Bacillota
TTC
Glu
>WENV183391428
OLZD01002255
280462
Bacillota
GAA
Phe
>WENV183391613
OLZD01008482
289123
Bacillota
GGT
Thr
>WENV183391289
OLZD01000482
175857
Bacillota
GTG
His
>WENV183391749
OLZD01020381
398833
Bacillota
TGT
Thr
>WENV183391291
OLZD01000482
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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