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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183394284
OLZG01000166
179231
Actinomycetota
TAC
Val
>WENV183394189
OLZG01000013
176499
Actinomycetota
CAT
Met
>WENV183394564
OLZG01003133
175883
Actinomycetota
GAT
Ile
>WENV183394534
OLZG01002200
280498
Actinomycetota
GTT
Asn
>WENV183394535
OLZG01002200
280498
Actinomycetota
GTT
Asn
>WENV183394570
OLZG01003276
280498
Actinomycetota
GTT
Asn
>WENV183394483
OLZG01001368
280503
Actinomycetota
CCT
Arg
>WENV183394681
OLZG01009412
56083
Actinomycetota
CGA
Ser
>WENV183394219
OLZG01000037
140768
Actinomycetota
TAG
Leu
>WENV183394809
OLZG01031317
176075
Actinomycetota
TCT
Arg
>WENV183394326
OLZG01000249
175837
Actinomycetota
ACG
Arg
>WENV183394409
OLZG01000552
280441
Actinomycetota
CCG
Arg
>WENV183394771
OLZG01022397
280702
Actinomycetota
GGC
Ala
>WENV183394595
OLZG01003699
398843
Actinomycetota
GTT
Asn
>WENV183394594
OLZG01003699
398843
Actinomycetota
GTT
Asn
>WENV183394434
OLZG01000733
176638
Actinomycetota
GGG
Pro
>WENV183394278
OLZG01000151
280524
Actinomycetota
TGC
Ala
>WENV183394671
OLZG01008338
291585
Actinomycetota
GCC
Gly
>WENV183394279
OLZG01000151
280523
Actinomycetota
GGC
Ala
>WENV183394481
OLZG01001306
280523
Actinomycetota
GGC
Ala
>WENV183394315
OLZG01000227
175841
Actinomycetota
TAT
Ile
>WENV183394479
OLZG01001275
175872
Actinomycetota
GTC
Asp
>WENV183394480
OLZG01001275
175872
Actinomycetota
GTC
Asp
>WENV183394186
OLZG01000013
20205
Actinomycetota
GCT
Ser
>WENV183394677
OLZG01009033
175926
Actinomycetota
CAT
Met
>WENV183394313
OLZG01000211
280450
Actinomycetota
TTT
Lys
>WENV183394235
OLZG01000068
480329
Actinomycetota
CCC
Gly
>WENV183394401
OLZG01000489
175882
Actinomycetota
TGG
Pro
>WENV183394441
OLZG01000756
20209
Actinomycetota
GAG
Leu
>WENV183394462
OLZG01001037
480319
Actinomycetota
TTG
Gln
>WENV183394216
OLZG01000037
280489
Actinomycetota
CTC
Glu
>WENV183394473
OLZG01001145
280499
Actinomycetota
CCT
Arg
>WENV183394217
OLZG01000037
398853
Actinomycetota
CTG
Gln
>WENV183394256
OLZG01000101
175843
Actinomycetota
CAA
Leu
>WENV183394505
OLZG01001765
203883
Actinomycetota
TCT
Arg
>WENV183394185
OLZG01000013
46642
Actinomycetota
CGA
Ser
>WENV183394236
OLZG01000068
104211
Actinomycetota
CAG
Leu
>WENV183394188
OLZG01000013
117903
Actinomycetota
GTA
Tyr
>WENV183394591
OLZG01003594
56071
Actinomycetota
TGA
Ser
>WENV183394255
OLZG01000101
147796
Actinomycetota
TAA
Leu
>WENV183394218
OLZG01000037
280470
Actinomycetota
CGT
Thr
>WENV183394812
OLZG01032493
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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