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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183395382
OLZH01009922
99852
Bacillota
GTA
Tyr
>WENV183395279
OLZH01005160
280500
Bacillota
TGC
Ala
>WENV183395558
OLZH01034706
179563
Bacillota
GAT
Ile
>WENV183395402
OLZH01011895
190476
Bacillota
CAT
Met
>WENV183394863
OLZH01000011
73664
Bacillota
CAG
Leu
>WENV183395556
OLZH01034649
280447
Bacillota
GAC
Val
>WENV183395581
OLZH01039106
73009
Bacillota
CAG
Leu
>WENV183394875
OLZH01000023
290325
Bacillota
GCC
Gly
>WENV183395501
OLZH01024877
175831
Bacillota
ACG
Arg
>WENV183394940
OLZH01000089
179810
Bacillota
TCT
Arg
>WENV183395289
OLZH01005490
178143
Bacillota
TTC
Glu
>WENV183394933
OLZH01000086
303718
Bacillota
TGT
Thr
>WENV183395281
OLZH01005172
323864
Bacillota
TGC
Ala
>WENV183395606
OLZH01048141
398857
Bacillota
TTC
Glu
>WENV183395473
OLZH01020308
117745
Bacillota
GTA
Tyr
>WENV183395403
OLZH01011895
398832
Bacillota
TTC
Glu
>WENV183395025
OLZH01000335
398832
Bacillota
TTC
Glu
>WENV183395048
OLZH01000479
118669
Bacillota
GTA
Tyr
>WENV183394941
OLZH01000089
175857
Bacillota
GTG
His
>WENV183395381
OLZH01009922
398833
Bacillota
TGT
Thr
>WENV183395628
OLZH01053351
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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