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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183397044
OLZJ01001190
99852
Bacillota
GTA
Tyr
>WENV183397165
OLZJ01002908
99852
Bacillota
GTA
Tyr
>WENV183397222
OLZJ01004760
99852
Bacillota
GTA
Tyr
>WENV183397454
OLZJ01032864
280500
Bacillota
TGC
Ala
>WENV183397163
OLZJ01002870
405363
Bacillota
GCA
Cys
>WENV183396918
OLZJ01000360
280428
Bacillota
GAA
Phe
>WENV183397515
OLZJ01047355
280428
Bacillota
GAA
Phe
>WENV183396852
OLZJ01000142
229015
Bacillota
GTG
His
>WENV183397478
OLZJ01037611
302145
Bacillota
GAA
Phe
>WENV183397553
OLZJ01056105
280492
Bacillota
CTT
Lys
>WENV183397120
OLZJ01002139
175842
Bacillota
CAC
Val
>WENV183397417
OLZJ01024776
184497
Bacillota
GGG
Pro
>WENV183397323
OLZJ01009395
179176
Bacillota
ACG
Arg
>WENV183397390
OLZJ01019014
215243
Bacillota
CAT
Met
>WENV183397177
OLZJ01003257
190476
Bacillota
CAT
Met
>WENV183396844
OLZJ01000132
82124
Bacillota
TAA
Leu
>WENV183396886
OLZJ01000209
73664
Bacillota
CAG
Leu
>WENV183396870
OLZJ01000178
73664
Bacillota
CAG
Leu
>WENV183397205
OLZJ01004023
280447
Bacillota
GAC
Val
>WENV183397084
OLZJ01001645
280447
Bacillota
GAC
Val
>WENV183397053
OLZJ01001335
5692
Bacillota
GCT
Ser
>WENV183397356
OLZJ01014005
186123
Bacillota
GTC
Asp
>WENV183397171
OLZJ01003117
73009
Bacillota
CAG
Leu
>WENV183397137
OLZJ01002489
73009
Bacillota
CAG
Leu
>WENV183397043
OLZJ01001190
73009
Bacillota
CAG
Leu
>WENV183397556
OLZJ01057476
291581
Bacillota
CGG
Pro
>WENV183397025
OLZJ01001112
175859
Bacillota
TCT
Arg
>WENV183397201
OLZJ01003925
175831
Bacillota
ACG
Arg
>WENV183397387
OLZJ01018873
332181
Bacillota
TGT
Thr
>WENV183396851
OLZJ01000142
179810
Bacillota
TCT
Arg
>WENV183396824
OLZJ01000095
179810
Bacillota
TCT
Arg
>WENV183396887
OLZJ01000211
284627
Bacillota
GAA
Phe
>WENV183396771
OLZJ01000039
284627
Bacillota
GAA
Phe
>WENV183396961
OLZJ01000568
294020
Bacillota
TAC
Val
>WENV183397291
OLZJ01007529
295350
Bacillota
TGC
Ala
>WENV183397041
OLZJ01001143
480322
Bacillota
CTG
Gln
>WENV183397048
OLZJ01001282
480322
Bacillota
CTG
Gln
>WENV183397188
OLZJ01003594
175868
Bacillota
GTT
Asn
>WENV183396879
OLZJ01000196
175868
Bacillota
GTT
Asn
>WENV183396837
OLZJ01000118
175868
Bacillota
GTT
Asn
>WENV183397216
OLZJ01004452
322848
Bacillota
CTT
Lys
>WENV183397187
OLZJ01003594
398854
Bacillota
CTC
Glu
>WENV183396878
OLZJ01000196
398854
Bacillota
CTC
Glu
>WENV183396920
OLZJ01000360
291576
Bacillota
CCC
Gly
>WENV183396917
OLZJ01000360
291576
Bacillota
CCC
Gly
>WENV183397168
OLZJ01003019
480324
Bacillota
TTG
Gln
>WENV183397109
OLZJ01002026
480324
Bacillota
TTG
Gln
>WENV183396840
OLZJ01000126
497729
Bacillota
CCA
Trp
>WENV183397173
OLZJ01003143
497729
Bacillota
CCA
Trp
>WENV183397036
OLZJ01001124
175899
Bacillota
GTC
Asp
>WENV183397425
OLZJ01026141
323864
Bacillota
TGC
Ala
>WENV183397277
OLZJ01006613
175911
Bacillota
GTC
Asp
>WENV183397337
OLZJ01011347
204381
Bacillota
GAT
Ile
>WENV183397367
OLZJ01015390
280444
Bacillota
GGT
Thr
>WENV183397067
OLZJ01001470
280444
Bacillota
GGT
Thr
>WENV183396845
OLZJ01000139
483485
Bacillota
CCC
Gly
>WENV183397038
OLZJ01001130
179755
Bacillota
CCG
Arg
>WENV183397136
OLZJ01002480
46835
Bacillota
TAA
Leu
>WENV183397178
OLZJ01003257
398832
Bacillota
TTC
Glu
>WENV183396951
OLZJ01000511
398832
Bacillota
TTC
Glu
>WENV183397045
OLZJ01001203
285601
Bacillota
TTC
Glu
>WENV183396825
OLZJ01000095
175857
Bacillota
GTG
His
>WENV183397114
OLZJ01002094
398833
Bacillota
TGT
Thr
>WENV183397066
OLZJ01001470
175849
Bacillota
GTC
Asp
>WENV183397504
OLZJ01045391
280486
Bacillota
TGC
Ala
>WENV183397357
OLZJ01014005
405393
Bacillota
GCC
Gly
>WENV183397052
OLZJ01001335
56074
Bacillota
TGA
Ser
>WENV183397078
OLZJ01001525
280473
Bacillota
TGG
Pro
>WENV183396976
OLZJ01000645
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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