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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183398477
OLZO01003640
99852
Bacillota
GTA
Tyr
>WENV183398362
OLZO01000934
280428
Bacillota
GAA
Phe
>WENV183398395
OLZO01001341
280428
Bacillota
GAA
Phe
>WENV183398490
OLZO01004075
228119
Bacillota
TCT
Arg
>WENV183398680
OLZO01036343
184497
Bacillota
GGG
Pro
>WENV183398442
OLZO01002450
190476
Bacillota
CAT
Met
>WENV183398377
OLZO01001144
280447
Bacillota
GAC
Val
>WENV183398389
OLZO01001283
5692
Bacillota
GCT
Ser
>WENV183398425
OLZO01002133
186123
Bacillota
GTC
Asp
>WENV183398613
OLZO01016940
284723
Bacillota
TAC
Val
>WENV183398334
OLZO01000713
73009
Bacillota
CAG
Leu
>WENV183398579
OLZO01010320
407726
Bacillota
CTG
Gln
>WENV183398429
OLZO01002139
291581
Bacillota
CGG
Pro
>WENV183398505
OLZO01004903
175859
Bacillota
TCT
Arg
>WENV183398467
OLZO01003065
398835
Bacillota
GCC
Gly
>WENV183398382
OLZO01001215
175831
Bacillota
ACG
Arg
>WENV183398426
OLZO01002133
291634
Bacillota
GAA
Phe
>WENV183398478
OLZO01003691
450453
Bacillota
CTC
Glu
>WENV183398428
OLZO01002139
480322
Bacillota
CTG
Gln
>WENV183398387
OLZO01001249
175868
Bacillota
GTT
Asn
>WENV183398386
OLZO01001249
398854
Bacillota
CTC
Glu
>WENV183398409
OLZO01001587
291576
Bacillota
CCC
Gly
>WENV183398354
OLZO01000824
480324
Bacillota
TTG
Gln
>WENV183398585
OLZO01011655
303718
Bacillota
TGT
Thr
>WENV183398635
OLZO01021858
73638
Bacillota
AAG
Leu
>WENV183398627
OLZO01020700
323864
Bacillota
TGC
Ala
>WENV183398644
OLZO01023959
175911
Bacillota
GTC
Asp
>WENV183398615
OLZO01017155
292374
Bacillota
TGC
Ala
>WENV183398463
OLZO01002904
280444
Bacillota
GGT
Thr
>WENV183398385
OLZO01001237
179755
Bacillota
CCG
Arg
>WENV183398443
OLZO01002450
398832
Bacillota
TTC
Glu
>WENV183398614
OLZO01017155
201856
Bacillota
GAT
Ile
>WENV183398552
OLZO01007182
398833
Bacillota
TGT
Thr
>WENV183398427
OLZO01002133
405393
Bacillota
GCC
Gly
>WENV183398388
OLZO01001283
56074
Bacillota
TGA
Ser
>WENV183398476
OLZO01003623
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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