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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183402744
OLZV01002719
398829
Bacteroidota
CCT
Arg
>WENV183402488
OLZV01000325
175838
Bacteroidota
GTT
Asn
>WENV183402790
OLZV01003782
400161
Bacteroidota
GGT
Thr
>WENV183402646
OLZV01001481
289031
Bacteroidota
CAT
Met
>WENV183402381
OLZV01000055
156422
Bacteroidota
TAC
Val
>WENV183402616
OLZV01001250
282852
Bacteroidota
TTT
Lys
>WENV183402854
OLZV01005254
483416
Bacteroidota
CTG
Gln
>WENV183402409
OLZV01000117
201819
Bacteroidota
CAT
Met
>WENV183402350
OLZV01000012
118221
Bacteroidota
CAA
Leu
>WENV183402973
OLZV01008990
56493
Bacteroidota
TGA
Ser
>WENV183403098
OLZV01015790
175903
Bacteroidota
GTG
His
>WENV183403153
OLZV01022936
118089
Bacteroidota
TAG
Leu
>WENV183402360
OLZV01000023
56385
Bacteroidota
TGA
Ser
>WENV183402719
OLZV01002378
20449
Bacteroidota
GGA
Ser
>WENV183402791
OLZV01003782
312035
Bacteroidota
CCA
Trp
>WENV183402574
OLZV01000802
242241
Bacteroidota
GTC
Asp
>WENV183402573
OLZV01000802
242241
Bacteroidota
GTC
Asp
>WENV183402496
OLZV01000382
179697
Bacteroidota
TGT
Thr
>WENV183403108
OLZV01016800
280451
Bacteroidota
CGT
Thr
>WENV183402984
OLZV01009486
418894
Bacteroidota
TTC
Glu
>WENV183402814
OLZV01004101
99847
Bacteroidota
GTA
Tyr
>WENV183402408
OLZV01000111
404109
Bacteroidota
CTC
Glu
>WENV183402713
OLZV01002277
186874
Bacteroidota
CAT
Met
>WENV183402356
OLZV01000016
46648
Bacteroidota
TAA
Leu
>WENV183402730
OLZV01002536
488746
Bacteroidota
CTG
Gln
>WENV183403274
OLZV01050627
280478
Bacteroidota
GCC
Gly
>WENV183402473
OLZV01000276
191205
Bacteroidota
TGG
Pro
>WENV183402355
OLZV01000016
481328
Bacteroidota
TTG
Gln
>WENV183402657
OLZV01001631
491385
Bacteroidota
TTG
Gln
>WENV183402580
OLZV01000818
280446
Bacteroidota
TTT
Lys
>WENV183402933
OLZV01007334
484496
Bacteroidota
TTG
Gln
>WENV183402717
OLZV01002345
365112
Bacteroidota
TTT
Lys
>WENV183402560
OLZV01000766
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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