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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183409547
OMAG01001343
406043
Verrucomicrobiota
GCA
Cys
>WENV183409231
OMAG01000003
293125
Verrucomicrobiota
GAA
Phe
>WENV183409246
OMAG01000007
406350
Verrucomicrobiota
TGT
Thr
>WENV183409238
OMAG01000005
148006
Verrucomicrobiota
CAA
Leu
>WENV183409343
OMAG01000106
101600
Verrucomicrobiota
AAG
Leu
>WENV183409460
OMAG01000519
293105
Verrucomicrobiota
CAT
Met
>WENV183409265
OMAG01000016
405901
Verrucomicrobiota
GCC
Gly
>WENV183409307
OMAG01000054
405901
Verrucomicrobiota
GCC
Gly
>WENV183409228
OMAG01000003
483642
Verrucomicrobiota
CCC
Gly
>WENV183409310
OMAG01000058
229220
Verrucomicrobiota
CAT
Met
>WENV183409273
OMAG01000023
8960
Verrucomicrobiota
CGA
Ser
>WENV183409239
OMAG01000005
101463
Verrucomicrobiota
TAA
Leu
>WENV183409254
OMAG01000009
157427
Verrucomicrobiota
GTC
Asp
>WENV183409247
OMAG01000007
293079
Verrucomicrobiota
CGC
Ala
>WENV183409269
OMAG01000019
120352
Verrucomicrobiota
TAG
Leu
>WENV183409240
OMAG01000005
292636
Verrucomicrobiota
>WENV183409458
OMAG01000519
298263
Verrucomicrobiota
TTC
Glu
>WENV183409245
OMAG01000007
298263
Verrucomicrobiota
TTC
Glu
>WENV183409244
OMAG01000007
298263
Verrucomicrobiota
TTC
Glu
>WENV183409277
OMAG01000028
293069
Verrucomicrobiota
CTT
Lys
>WENV183409268
OMAG01000019
406336
Verrucomicrobiota
CCT
Arg
>WENV183409229
OMAG01000003
406369
Verrucomicrobiota
CCG
Arg
>WENV183409278
OMAG01000030
405940
Verrucomicrobiota
GGT
Thr
>WENV183409253
OMAG01000009
406044
Verrucomicrobiota
CTG
Gln
>WENV183409227
OMAG01000003
187556
Verrucomicrobiota
GGG
Pro
>WENV183409459
OMAG01000519
406037
Verrucomicrobiota
GTG
His
>WENV183409335
OMAG01000096
406360
Verrucomicrobiota
GAC
Val
>WENV183409226
OMAG01000002
187548
Verrucomicrobiota
TCT
Arg
>WENV183409276
OMAG01000028
406040
Verrucomicrobiota
CGT
Thr
>WENV183409264
OMAG01000016
57652
Verrucomicrobiota
TGA
Ser
>WENV183409308
OMAG01000055
406039
Verrucomicrobiota
CAC
Val
>WENV183409397
OMAG01000220
75458
Verrucomicrobiota
CAG
Leu
>WENV183409296
OMAG01000041
406368
Verrucomicrobiota
TTG
Gln
>WENV183409518
OMAG01000896
21159
Verrucomicrobiota
GGA
Ser
>WENV183409260
OMAG01000014
101461
Verrucomicrobiota
GTA
Tyr
>WENV183409258
OMAG01000012
293095
Verrucomicrobiota
TTT
Lys
>WENV183409474
OMAG01000576
187561
Verrucomicrobiota
CGG
Pro
>WENV183409266
OMAG01000016
406342
Verrucomicrobiota
CAT
Met
>WENV183409259
OMAG01000014
406351
Verrucomicrobiota
GTT
Asn
>WENV183409297
OMAG01000041
303305
Verrucomicrobiota
GGC
Ala
>WENV183409230
OMAG01000003
507474
Verrucomicrobiota
TCC
Gly
>WENV183409401
OMAG01000239
406346
Verrucomicrobiota
TAC
Val
>WENV183409241
OMAG01000005
8938
Verrucomicrobiota
GCT
Ser
>WENV183409232
OMAG01000003
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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