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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183411442
OMAL01000098
117741
Bacteroidota
TAG
Leu
>WENV183411428
OMAL01000078
398829
Bacteroidota
CCT
Arg
>WENV183411398
OMAL01000037
404226
Bacteroidota
CCT
Arg
>WENV183411997
OMAL01009630
175904
Bacteroidota
CGG
Pro
>WENV183411500
OMAL01000213
280557
Bacteroidota
CAT
Met
>WENV183411507
OMAL01000227
280557
Bacteroidota
CAT
Met
>WENV183411449
OMAL01000107
20206
Bacteroidota
GGA
Ser
>WENV183411397
OMAL01000037
398871
Bacteroidota
TTC
Glu
>WENV183411373
OMAL01000025
56493
Bacteroidota
TGA
Ser
>WENV183411451
OMAL01000113
175906
Bacteroidota
GTG
His
>WENV183411363
OMAL01000016
175903
Bacteroidota
GTG
His
>WENV183411396
OMAL01000035
351598
Bacteroidota
CGG
Pro
>WENV183411400
OMAL01000040
118089
Bacteroidota
TAG
Leu
>WENV183411534
OMAL01000290
203954
Bacteroidota
GTC
Asp
>WENV183411423
OMAL01000068
178907
Bacteroidota
TCT
Arg
>WENV183411464
OMAL01000131
20449
Bacteroidota
GGA
Ser
>WENV183411445
OMAL01000102
56072
Bacteroidota
TAA
Leu
>WENV183411332
OMAL01000012
56072
Bacteroidota
TAA
Leu
>WENV183411603
OMAL01000544
280451
Bacteroidota
CGT
Thr
>WENV183411421
OMAL01000067
99847
Bacteroidota
GTA
Tyr
>WENV183411314
OMAL01000002
99847
Bacteroidota
GTA
Tyr
>WENV183411797
OMAL01002456
399200
Bacteroidota
CAT
Met
>WENV183411614
OMAL01000590
399200
Bacteroidota
CAT
Met
>WENV183412116
OMAL01023539
186874
Bacteroidota
CAT
Met
>WENV183411476
OMAL01000163
488746
Bacteroidota
CTG
Gln
>WENV183411448
OMAL01000107
488746
Bacteroidota
CTG
Gln
>WENV183411549
OMAL01000332
280478
Bacteroidota
GCC
Gly
>WENV183411477
OMAL01000163
27524
Bacteroidota
GGA
Ser
>WENV183411792
OMAL01002312
73011
Bacteroidota
CAA
Leu
>WENV183411692
OMAL01001095
480318
Bacteroidota
CTG
Gln
>WENV183411431
OMAL01000086
398828
Bacteroidota
CCG
Arg
>WENV183411416
OMAL01000061
398828
Bacteroidota
CCG
Arg
>WENV183411504
OMAL01000220
74084
Bacteroidota
CAG
Leu
>WENV183411473
OMAL01000147
69204
Bacteroidota
TGA
Ser
>WENV183411362
OMAL01000016
69204
Bacteroidota
TGA
Ser
>WENV183411377
OMAL01000032
484496
Bacteroidota
TTG
Gln
>WENV183411364
OMAL01000016
27502
Bacteroidota
GGA
Ser
>WENV183411422
OMAL01000068
285750
Bacteroidota
CCC
Gly
>WENV183412156
OMAL01035608
117804
Bacteroidota
TAG
Leu
>WENV183411453
OMAL01000117
365112
Bacteroidota
TTT
Lys
>WENV183411320
OMAL01000004
365112
Bacteroidota
TTT
Lys
>WENV183411553
OMAL01000340
398836
Bacteroidota
GCA
Cys
>WENV183411326
OMAL01000008
398836
Bacteroidota
GCA
Cys
>WENV183411495
OMAL01000204
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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