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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183417350
OMAU01005888
280500
Bacillota
TGC
Ala
>WENV183417366
OMAU01011018
280492
Bacillota
CTT
Lys
>WENV183417322
OMAU01001988
5692
Bacillota
GCT
Ser
>WENV183417308
OMAU01000994
73009
Bacillota
CAG
Leu
>WENV183417347
OMAU01004954
291581
Bacillota
CGG
Pro
>WENV183417286
OMAU01000343
175859
Bacillota
TCT
Arg
>WENV183417295
OMAU01000452
280436
Bacillota
TGC
Ala
>WENV183417264
OMAU01000044
175831
Bacillota
ACG
Arg
>WENV183417279
OMAU01000235
291634
Bacillota
GAA
Phe
>WENV183417345
OMAU01004647
480322
Bacillota
CTG
Gln
>WENV183417269
OMAU01000113
303718
Bacillota
TGT
Thr
>WENV183417288
OMAU01000393
186051
Bacillota
GAT
Ile
>WENV183417294
OMAU01000443
280444
Bacillota
GGT
Thr
>WENV183417331
OMAU01002816
179755
Bacillota
CCG
Arg
>WENV183417328
OMAU01002794
291650
Bacillota
TGC
Ala
>WENV183417266
OMAU01000047
398832
Bacillota
TTC
Glu
>WENV183417319
OMAU01001929
175857
Bacillota
GTG
His
>WENV183417298
OMAU01000461
398833
Bacillota
TGT
Thr
>WENV183417330
OMAU01002798
175849
Bacillota
GTC
Asp
>WENV183417314
OMAU01001339
280486
Bacillota
TGC
Ala
>WENV183417280
OMAU01000235
405393
Bacillota
GCC
Gly
>WENV183417321
OMAU01001988
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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