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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183419203
OMAZ01000057
295385
Bacteroidota
CCA
Trp
>WENV183419278
OMAZ01000153
285360
Bacteroidota
TTT
Lys
>WENV183419340
OMAZ01000282
117741
Bacteroidota
TAG
Leu
>WENV183419289
OMAZ01000171
175838
Bacteroidota
GTT
Asn
>WENV183419332
OMAZ01000271
289031
Bacteroidota
CAT
Met
>WENV183419398
OMAZ01000544
280557
Bacteroidota
CAT
Met
>WENV183419320
OMAZ01000227
20492
Bacteroidota
GGA
Ser
>WENV183419301
OMAZ01000190
20206
Bacteroidota
GGA
Ser
>WENV183419303
OMAZ01000196
483416
Bacteroidota
CTG
Gln
>WENV183419444
OMAZ01001283
56493
Bacteroidota
TGA
Ser
>WENV183419690
OMAZ01018778
175906
Bacteroidota
GTG
His
>WENV183419213
OMAZ01000065
175903
Bacteroidota
GTG
His
>WENV183419383
OMAZ01000467
398872
Bacteroidota
GGT
Thr
>WENV183419726
OMAZ01027734
175908
Bacteroidota
GTC
Asp
>WENV183419571
OMAZ01008322
178907
Bacteroidota
TCT
Arg
>WENV183419388
OMAZ01000490
405877
Bacteroidota
GGT
Thr
>WENV183419822
OMAZ01053075
182267
Bacteroidota
GTT
Asn
>WENV183419645
OMAZ01014053
20449
Bacteroidota
GGA
Ser
>WENV183419210
OMAZ01000062
21127
Bacteroidota
GGA
Ser
>WENV183419311
OMAZ01000218
57807
Bacteroidota
TGA
Ser
>WENV183419189
OMAZ01000050
57807
Bacteroidota
TGA
Ser
>WENV183419419
OMAZ01000764
175902
Bacteroidota
GGC
Ala
>WENV183419791
OMAZ01043951
179697
Bacteroidota
TGT
Thr
>WENV183419370
OMAZ01000394
480404
Bacteroidota
TTG
Gln
>WENV183419333
OMAZ01000273
280451
Bacteroidota
CGT
Thr
>WENV183419302
OMAZ01000192
99847
Bacteroidota
GTA
Tyr
>WENV183419834
OMAZ01057307
186874
Bacteroidota
CAT
Met
>WENV183419423
OMAZ01000832
332896
Bacteroidota
TTT
Lys
>WENV183419300
OMAZ01000190
488746
Bacteroidota
CTG
Gln
>WENV183419211
OMAZ01000064
280478
Bacteroidota
GCC
Gly
>WENV183419829
OMAZ01054902
73011
Bacteroidota
CAA
Leu
>WENV183419667
OMAZ01016596
280515
Bacteroidota
CCA
Trp
>WENV183419250
OMAZ01000113
158068
Bacteroidota
GGG
Pro
>WENV183419408
OMAZ01000589
158068
Bacteroidota
GGG
Pro
>WENV183419625
OMAZ01012043
186142
Bacteroidota
GAT
Ile
>WENV183419281
OMAZ01000160
159415
Bacteroidota
TAC
Val
>WENV183419627
OMAZ01012301
480325
Bacteroidota
CTG
Gln
>WENV183419276
OMAZ01000149
280446
Bacteroidota
TTT
Lys
>WENV183419173
OMAZ01000036
484496
Bacteroidota
TTG
Gln
>WENV183419590
OMAZ01009968
285750
Bacteroidota
CCC
Gly
>WENV183419744
OMAZ01031074
416636
Bacteroidota
TTC
Glu
>WENV183419367
OMAZ01000363
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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