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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183420923
OMBB01000052
117741
Bacteroidota
TAG
Leu
>WENV183421199
OMBB01002259
398829
Bacteroidota
CCT
Arg
>WENV183421311
OMBB01006172
404226
Bacteroidota
CCT
Arg
>WENV183421425
OMBB01019173
175904
Bacteroidota
CGG
Pro
>WENV183420860
OMBB01000003
400161
Bacteroidota
GGT
Thr
>WENV183421021
OMBB01000371
156422
Bacteroidota
TAC
Val
>WENV183421371
OMBB01011076
398871
Bacteroidota
TTC
Glu
>WENV183420863
OMBB01000005
118221
Bacteroidota
CAA
Leu
>WENV183421093
OMBB01000768
56493
Bacteroidota
TGA
Ser
>WENV183421051
OMBB01000450
56493
Bacteroidota
TGA
Ser
>WENV183421079
OMBB01000644
175903
Bacteroidota
GTG
His
>WENV183421303
OMBB01005865
118089
Bacteroidota
TAG
Leu
>WENV183421478
OMBB01026517
178907
Bacteroidota
TCT
Arg
>WENV183420959
OMBB01000134
56385
Bacteroidota
TGA
Ser
>WENV183420877
OMBB01000018
182267
Bacteroidota
GTT
Asn
>WENV183420861
OMBB01000003
312035
Bacteroidota
CCA
Trp
>WENV183421204
OMBB01002314
242241
Bacteroidota
GTC
Asp
>WENV183420879
OMBB01000018
56072
Bacteroidota
TAA
Leu
>WENV183420862
OMBB01000003
175944
Bacteroidota
CAT
Met
>WENV183421387
OMBB01012720
175902
Bacteroidota
GGC
Ala
>WENV183421306
OMBB01006067
179697
Bacteroidota
TGT
Thr
>WENV183421319
OMBB01006540
480404
Bacteroidota
TTG
Gln
>WENV183421070
OMBB01000580
280451
Bacteroidota
CGT
Thr
>WENV183421279
OMBB01004211
418894
Bacteroidota
TTC
Glu
>WENV183421364
OMBB01009974
99847
Bacteroidota
GTA
Tyr
>WENV183421185
OMBB01001964
399200
Bacteroidota
CAT
Met
>WENV183421073
OMBB01000591
404109
Bacteroidota
CTC
Glu
>WENV183420955
OMBB01000119
46648
Bacteroidota
TAA
Leu
>WENV183421041
OMBB01000432
488746
Bacteroidota
CTG
Gln
>WENV183421355
OMBB01009048
280478
Bacteroidota
GCC
Gly
>WENV183421307
OMBB01006101
73011
Bacteroidota
CAA
Leu
>WENV183421402
OMBB01014156
186142
Bacteroidota
GAT
Ile
>WENV183420952
OMBB01000116
398828
Bacteroidota
CCG
Arg
>WENV183421356
OMBB01009048
74084
Bacteroidota
CAG
Leu
>WENV183421354
OMBB01008872
176192
Bacteroidota
TCT
Arg
>WENV183421104
OMBB01000833
481328
Bacteroidota
TTG
Gln
>WENV183421297
OMBB01005287
69204
Bacteroidota
TGA
Ser
>WENV183421010
OMBB01000336
484496
Bacteroidota
TTG
Gln
>WENV183421067
OMBB01000571
27502
Bacteroidota
GGA
Ser
>WENV183421262
OMBB01003762
285750
Bacteroidota
CCC
Gly
>WENV183421329
OMBB01007031
373714
Bacteroidota
GCC
Gly
>WENV183421450
OMBB01021973
188555
Bacteroidota
CAT
Met
>WENV183421403
OMBB01014156
186143
Bacteroidota
TGC
Ala
>WENV183421285
OMBB01004729
365112
Bacteroidota
TTT
Lys
>WENV183421065
OMBB01000554
365112
Bacteroidota
TTT
Lys
>WENV183420951
OMBB01000106
398836
Bacteroidota
GCA
Cys
>WENV183420936
OMBB01000081
398836
Bacteroidota
GCA
Cys
>WENV183421164
OMBB01001632
170323
Bacteroidota
GGG
Pro
>WENV183421110
OMBB01000870
170323
Bacteroidota
GGG
Pro
>WENV183421005
OMBB01000300
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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