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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183426748
OMBM01000125
176499
Actinomycetota
CAT
Met
>WENV183427337
OMBM01037249
285746
Actinomycetota
GGC
Ala
>WENV183426709
OMBM01000081
280498
Actinomycetota
GTT
Asn
>WENV183426710
OMBM01000081
280498
Actinomycetota
GTT
Asn
>WENV183426714
OMBM01000087
280498
Actinomycetota
GTT
Asn
>WENV183427029
OMBM01002365
56083
Actinomycetota
CGA
Ser
>WENV183426924
OMBM01000740
140768
Actinomycetota
TAG
Leu
>WENV183427140
OMBM01006836
176075
Actinomycetota
TCT
Arg
>WENV183427168
OMBM01008613
175848
Actinomycetota
TGG
Pro
>WENV183427051
OMBM01003086
20208
Actinomycetota
GAG
Leu
>WENV183426911
OMBM01000653
175837
Actinomycetota
ACG
Arg
>WENV183427199
OMBM01010806
29393
Actinomycetota
GCT
Ser
>WENV183426952
OMBM01000909
280441
Actinomycetota
CCG
Arg
>WENV183427153
OMBM01007682
280702
Actinomycetota
GGC
Ala
>WENV183427290
OMBM01025341
176077
Actinomycetota
CAT
Met
>WENV183426917
OMBM01000717
176638
Actinomycetota
GGG
Pro
>WENV183426949
OMBM01000888
280524
Actinomycetota
TGC
Ala
>WENV183427110
OMBM01004962
398948
Actinomycetota
TTC
Glu
>WENV183426713
OMBM01000087
280523
Actinomycetota
GGC
Ala
>WENV183426950
OMBM01000888
280523
Actinomycetota
GGC
Ala
>WENV183427112
OMBM01005177
191955
Actinomycetota
TGT
Thr
>WENV183426982
OMBM01001222
175841
Actinomycetota
TAT
Ile
>WENV183427150
OMBM01007518
280544
Actinomycetota
GTG
His
>WENV183427320
OMBM01032458
280536
Actinomycetota
CTT
Lys
>WENV183427052
OMBM01003092
280496
Actinomycetota
CGT
Thr
>WENV183427005
OMBM01001612
280703
Actinomycetota
CCT
Arg
>WENV183426869
OMBM01000461
20205
Actinomycetota
GCT
Ser
>WENV183427202
OMBM01011285
175926
Actinomycetota
CAT
Met
>WENV183426759
OMBM01000159
280450
Actinomycetota
TTT
Lys
>WENV183426997
OMBM01001427
480329
Actinomycetota
CCC
Gly
>WENV183426886
OMBM01000529
175882
Actinomycetota
TGG
Pro
>WENV183426877
OMBM01000504
20209
Actinomycetota
GAG
Leu
>WENV183426715
OMBM01000087
480319
Actinomycetota
TTG
Gln
>WENV183426893
OMBM01000555
280489
Actinomycetota
CTC
Glu
>WENV183426892
OMBM01000554
280499
Actinomycetota
CCT
Arg
>WENV183426894
OMBM01000555
398853
Actinomycetota
CTG
Gln
>WENV183427133
OMBM01006526
175843
Actinomycetota
CAA
Leu
>WENV183426885
OMBM01000529
175843
Actinomycetota
CAA
Leu
>WENV183426883
OMBM01000526
203883
Actinomycetota
TCT
Arg
>WENV183426992
OMBM01001321
56075
Actinomycetota
TGA
Ser
>WENV183426902
OMBM01000605
46642
Actinomycetota
CGA
Ser
>WENV183426853
OMBM01000392
104211
Actinomycetota
CAG
Leu
>WENV183427201
OMBM01011229
317680
Actinomycetota
CCG
Arg
>WENV183426747
OMBM01000125
117903
Actinomycetota
GTA
Tyr
>WENV183426882
OMBM01000524
56071
Actinomycetota
TGA
Ser
>WENV183426705
OMBM01000076
147796
Actinomycetota
TAA
Leu
>WENV183426923
OMBM01000740
280470
Actinomycetota
CGT
Thr
>WENV183427130
OMBM01006435
480376
Actinomycetota
CCC
Gly
>WENV183426871
OMBM01000469
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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