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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183428780
OMBO01000263
204388
Verrucomicrobiota
CAT
Met
>WENV183428761
OMBO01000239
406043
Verrucomicrobiota
GCA
Cys
>WENV183428903
OMBO01000482
293125
Verrucomicrobiota
GAA
Phe
>WENV183428644
OMBO01000103
406350
Verrucomicrobiota
TGT
Thr
>WENV183428726
OMBO01000192
148006
Verrucomicrobiota
CAA
Leu
>WENV183428760
OMBO01000239
101600
Verrucomicrobiota
AAG
Leu
>WENV183428898
OMBO01000466
293105
Verrucomicrobiota
CAT
Met
>WENV183428779
OMBO01000261
405901
Verrucomicrobiota
GCC
Gly
>WENV183429060
OMBO01001663
405901
Verrucomicrobiota
GCC
Gly
>WENV183429029
OMBO01001282
483642
Verrucomicrobiota
CCC
Gly
>WENV183428908
OMBO01000501
8960
Verrucomicrobiota
CGA
Ser
>WENV183428770
OMBO01000249
101463
Verrucomicrobiota
TAA
Leu
>WENV183429077
OMBO01001917
157427
Verrucomicrobiota
GTC
Asp
>WENV183428965
OMBO01000814
293079
Verrucomicrobiota
CGC
Ala
>WENV183428999
OMBO01001062
120352
Verrucomicrobiota
TAG
Leu
>WENV183428771
OMBO01000249
292636
Verrucomicrobiota
>WENV183429030
OMBO01001282
489412
Verrucomicrobiota
TCC
Gly
>WENV183428896
OMBO01000466
298263
Verrucomicrobiota
TTC
Glu
>WENV183428666
OMBO01000126
293069
Verrucomicrobiota
CTT
Lys
>WENV183428832
OMBO01000346
406336
Verrucomicrobiota
CCT
Arg
>WENV183428955
OMBO01000731
406369
Verrucomicrobiota
CCG
Arg
>WENV183428576
OMBO01000061
405940
Verrucomicrobiota
GGT
Thr
>WENV183428961
OMBO01000775
406044
Verrucomicrobiota
CTG
Gln
>WENV183428664
OMBO01000123
187556
Verrucomicrobiota
GGG
Pro
>WENV183428897
OMBO01000466
406037
Verrucomicrobiota
GTG
His
>WENV183428982
OMBO01000955
406360
Verrucomicrobiota
GAC
Val
>WENV183428978
OMBO01000908
187548
Verrucomicrobiota
TCT
Arg
>WENV183428665
OMBO01000126
406040
Verrucomicrobiota
CGT
Thr
>WENV183428813
OMBO01000313
57652
Verrucomicrobiota
TGA
Ser
>WENV183428895
OMBO01000461
406039
Verrucomicrobiota
CAC
Val
>WENV183428935
OMBO01000596
406368
Verrucomicrobiota
TTG
Gln
>WENV183428824
OMBO01000327
21159
Verrucomicrobiota
GGA
Ser
>WENV183428555
OMBO01000051
101461
Verrucomicrobiota
GTA
Tyr
>WENV183428769
OMBO01000247
293095
Verrucomicrobiota
TTT
Lys
>WENV183428959
OMBO01000758
187561
Verrucomicrobiota
CGG
Pro
>WENV183429072
OMBO01001859
406342
Verrucomicrobiota
CAT
Met
>WENV183428554
OMBO01000051
406351
Verrucomicrobiota
GTT
Asn
>WENV183428684
OMBO01000142
303305
Verrucomicrobiota
GGC
Ala
>WENV183428872
OMBO01000410
406346
Verrucomicrobiota
TAC
Val
>WENV183428772
OMBO01000249
8938
Verrucomicrobiota
GCT
Ser
>WENV183428904
OMBO01000482
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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