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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183434578
OMBZ01010889
99852
Bacillota
GTA
Tyr
>WENV183434493
OMBZ01004669
280428
Bacillota
GAA
Phe
>WENV183434491
OMBZ01004669
280466
Bacillota
TAC
Val
>WENV183434715
OMBZ01038790
194260
Bacillota
GAT
Ile
>WENV183434674
OMBZ01023789
407852
Bacillota
TTC
Glu
>WENV183434433
OMBZ01002495
295166
Bacillota
TGC
Ala
>WENV183434349
OMBZ01000624
5692
Bacillota
GCT
Ser
>WENV183434744
OMBZ01053584
184171
Bacillota
CAT
Met
>WENV183434679
OMBZ01024984
407840
Bacillota
TTC
Glu
>WENV183434454
OMBZ01003122
291581
Bacillota
CGG
Pro
>WENV183434357
OMBZ01000711
175859
Bacillota
TCT
Arg
>WENV183434463
OMBZ01003263
480322
Bacillota
CTG
Gln
>WENV183434416
OMBZ01002014
175868
Bacillota
GTT
Asn
>WENV183434609
OMBZ01014557
398854
Bacillota
CTC
Glu
>WENV183434368
OMBZ01000983
291576
Bacillota
CCC
Gly
>WENV183434607
OMBZ01014424
480324
Bacillota
TTG
Gln
>WENV183434441
OMBZ01002640
179755
Bacillota
CCG
Arg
>WENV183434417
OMBZ01002083
179755
Bacillota
CCG
Arg
>WENV183434566
OMBZ01010073
312380
Bacillota
TAC
Val
>WENV183434568
OMBZ01010073
280483
Bacillota
GAA
Phe
>WENV183434569
OMBZ01010073
285756
Bacillota
GCC
Gly
>WENV183434534
OMBZ01007529
398833
Bacillota
TGT
Thr
>WENV183434492
OMBZ01004669
175849
Bacillota
GTC
Asp
>WENV183434348
OMBZ01000624
56074
Bacillota
TGA
Ser
>WENV183434550
OMBZ01008671
280473
Bacillota
TGG
Pro
>WENV183434390
OMBZ01001384
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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