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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183439196
OMCF01050713
405363
Bacillota
GCA
Cys
>WENV183438680
OMCF01001961
280428
Bacillota
GAA
Phe
>WENV183438960
OMCF01015081
291579
Bacillota
GAA
Phe
>WENV183438516
OMCF01000283
280492
Bacillota
CTT
Lys
>WENV183439128
OMCF01037096
175842
Bacillota
CAC
Val
>WENV183439096
OMCF01031880
29930
Bacillota
GGA
Ser
>WENV183438416
OMCF01000066
407852
Bacillota
TTC
Glu
>WENV183439167
OMCF01041469
179563
Bacillota
GAT
Ile
>WENV183438770
OMCF01004355
295166
Bacillota
TGC
Ala
>WENV183438749
OMCF01003851
190476
Bacillota
CAT
Met
>WENV183438532
OMCF01000362
73664
Bacillota
CAG
Leu
>WENV183438829
OMCF01006885
73009
Bacillota
CAG
Leu
>WENV183438739
OMCF01003373
481217
Bacillota
GCA
Cys
>WENV183439057
OMCF01026572
291581
Bacillota
CGG
Pro
>WENV183439117
OMCF01036189
175859
Bacillota
TCT
Arg
>WENV183439077
OMCF01029613
21311
Bacillota
GCT
Ser
>WENV183439224
OMCF01059404
291634
Bacillota
GAA
Phe
>WENV183439056
OMCF01026572
480322
Bacillota
CTG
Gln
>WENV183438954
OMCF01014856
175868
Bacillota
GTT
Asn
>WENV183439177
OMCF01044139
119278
Bacillota
TAG
Leu
>WENV183438684
OMCF01001995
398854
Bacillota
CTC
Glu
>WENV183438612
OMCF01001163
303718
Bacillota
TGT
Thr
>WENV183438420
OMCF01000072
56079
Bacillota
AAG
Leu
>WENV183438531
OMCF01000362
56079
Bacillota
AAG
Leu
>WENV183439163
OMCF01040690
186051
Bacillota
GAT
Ile
>WENV183438589
OMCF01000829
117745
Bacillota
GTA
Tyr
>WENV183438902
OMCF01010444
280444
Bacillota
GGT
Thr
>WENV183438521
OMCF01000306
46643
Bacillota
TGA
Ser
>WENV183438653
OMCF01001655
179755
Bacillota
CCG
Arg
>WENV183438750
OMCF01003851
398832
Bacillota
TTC
Glu
>WENV183438492
OMCF01000190
280462
Bacillota
GAA
Phe
>WENV183438496
OMCF01000197
398852
Bacillota
CTC
Glu
>WENV183439194
OMCF01049804
309916
Bacillota
TTT
Lys
>WENV183438440
OMCF01000102
175857
Bacillota
GTG
His
>WENV183438828
OMCF01006872
285756
Bacillota
GCC
Gly
>WENV183438493
OMCF01000190
280463
Bacillota
TTT
Lys
>WENV183439161
OMCF01040428
56074
Bacillota
TGA
Ser
>WENV183439223
OMCF01059182
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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