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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183441848
OMCK01013374
349107
Bacillota
GCC
Gly
>WENV183441834
OMCK01009889
291579
Bacillota
GAA
Phe
>WENV183441865
OMCK01017037
280447
Bacillota
GAC
Val
>WENV183441782
OMCK01003613
73009
Bacillota
CAG
Leu
>WENV183441856
OMCK01013819
291581
Bacillota
CGG
Pro
>WENV183441862
OMCK01015212
175859
Bacillota
TCT
Arg
>WENV183441855
OMCK01013819
480322
Bacillota
CTG
Gln
>WENV183441801
OMCK01005050
280444
Bacillota
GGT
Thr
>WENV183441821
OMCK01007826
291597
Bacillota
TGC
Ala
>WENV183441780
OMCK01003262
398832
Bacillota
TTC
Glu
>WENV183441800
OMCK01005050
175849
Bacillota
GTC
Asp
>WENV183441783
OMCK01003723
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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