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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183464013
OMDZ01000247
406043
Verrucomicrobiota
GCA
Cys
>WENV183464199
OMDZ01001615
293125
Verrucomicrobiota
GAA
Phe
>WENV183464271
OMDZ01003022
406350
Verrucomicrobiota
TGT
Thr
>WENV183464040
OMDZ01000350
148006
Verrucomicrobiota
CAA
Leu
>WENV183463942
OMDZ01000106
101600
Verrucomicrobiota
AAG
Leu
>WENV183464211
OMDZ01001765
293105
Verrucomicrobiota
CAT
Met
>WENV183464390
OMDZ01005574
405901
Verrucomicrobiota
GCC
Gly
>WENV183464080
OMDZ01000605
483642
Verrucomicrobiota
CCC
Gly
>WENV183464102
OMDZ01000725
229220
Verrucomicrobiota
CAT
Met
>WENV183464240
OMDZ01002353
8960
Verrucomicrobiota
CGA
Ser
>WENV183464196
OMDZ01001608
101463
Verrucomicrobiota
TAA
Leu
>WENV183464162
OMDZ01001157
157427
Verrucomicrobiota
GTC
Asp
>WENV183464153
OMDZ01001113
293079
Verrucomicrobiota
CGC
Ala
>WENV183463954
OMDZ01000119
120352
Verrucomicrobiota
TAG
Leu
>WENV183464428
OMDZ01006460
292636
Verrucomicrobiota
>WENV183464084
OMDZ01000605
489412
Verrucomicrobiota
TCC
Gly
>WENV183464014
OMDZ01000247
298263
Verrucomicrobiota
TTC
Glu
>WENV183464008
OMDZ01000227
293069
Verrucomicrobiota
CTT
Lys
>WENV183463955
OMDZ01000119
406336
Verrucomicrobiota
CCT
Arg
>WENV183464011
OMDZ01000236
406369
Verrucomicrobiota
CCG
Arg
>WENV183463952
OMDZ01000116
405940
Verrucomicrobiota
GGT
Thr
>WENV183464138
OMDZ01000965
406044
Verrucomicrobiota
CTG
Gln
>WENV183464148
OMDZ01001082
187556
Verrucomicrobiota
GGG
Pro
>WENV183464210
OMDZ01001765
406037
Verrucomicrobiota
GTG
His
>WENV183464270
OMDZ01002960
406360
Verrucomicrobiota
GAC
Val
>WENV183464024
OMDZ01000308
187548
Verrucomicrobiota
TCT
Arg
>WENV183464007
OMDZ01000227
406040
Verrucomicrobiota
CGT
Thr
>WENV183464062
OMDZ01000440
57652
Verrucomicrobiota
TGA
Ser
>WENV183464065
OMDZ01000470
406039
Verrucomicrobiota
CAC
Val
>WENV183464141
OMDZ01001003
75458
Verrucomicrobiota
CAG
Leu
>WENV183464027
OMDZ01000312
406368
Verrucomicrobiota
TTG
Gln
>WENV183464001
OMDZ01000214
21159
Verrucomicrobiota
GGA
Ser
>WENV183463956
OMDZ01000124
101461
Verrucomicrobiota
GTA
Tyr
>WENV183464244
OMDZ01002399
293095
Verrucomicrobiota
TTT
Lys
>WENV183464180
OMDZ01001357
187561
Verrucomicrobiota
CGG
Pro
>WENV183464369
OMDZ01004756
406351
Verrucomicrobiota
GTT
Asn
>WENV183464026
OMDZ01000312
303305
Verrucomicrobiota
GGC
Ala
>WENV183464179
OMDZ01001356
406346
Verrucomicrobiota
TAC
Val
>WENV183464103
OMDZ01000726
8938
Verrucomicrobiota
GCT
Ser
>WENV183464200
OMDZ01001615
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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