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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183467461
OMED01001039
400161
Bacteroidota
GGT
Thr
>WENV183467137
OMED01000046
289031
Bacteroidota
CAT
Met
>WENV183467254
OMED01000189
289031
Bacteroidota
CAT
Met
>WENV183467666
OMED01005483
156422
Bacteroidota
TAC
Val
>WENV183468047
OMED01055496
280557
Bacteroidota
CAT
Met
>WENV183467167
OMED01000083
483416
Bacteroidota
CTG
Gln
>WENV183467186
OMED01000112
483416
Bacteroidota
CTG
Gln
>WENV183467368
OMED01000555
483416
Bacteroidota
CTG
Gln
>WENV183467640
OMED01004401
118221
Bacteroidota
CAA
Leu
>WENV183467990
OMED01040522
351598
Bacteroidota
CGG
Pro
>WENV183467667
OMED01005483
172085
Bacteroidota
TAC
Val
>WENV183467134
OMED01000045
405877
Bacteroidota
GGT
Thr
>WENV183467770
OMED01010234
56385
Bacteroidota
TGA
Ser
>WENV183467870
OMED01018050
29791
Bacteroidota
GCT
Ser
>WENV183467462
OMED01001039
312035
Bacteroidota
CCA
Trp
>WENV183467458
OMED01001032
242241
Bacteroidota
GTC
Asp
>WENV183467308
OMED01000346
21127
Bacteroidota
GGA
Ser
>WENV183467871
OMED01018050
398860
Bacteroidota
CTC
Glu
>WENV183467987
OMED01040219
399200
Bacteroidota
CAT
Met
>WENV183467390
OMED01000674
404109
Bacteroidota
CTC
Glu
>WENV183467389
OMED01000674
404109
Bacteroidota
CTC
Glu
>WENV183467154
OMED01000069
186874
Bacteroidota
CAT
Met
>WENV183467409
OMED01000781
46648
Bacteroidota
TAA
Leu
>WENV183467589
OMED01002725
183889
Bacteroidota
GGC
Ala
>WENV183467712
OMED01007227
481328
Bacteroidota
TTG
Gln
>WENV183468010
OMED01045579
69204
Bacteroidota
TGA
Ser
>WENV183467781
OMED01011081
484496
Bacteroidota
TTG
Gln
>WENV183467524
OMED01001802
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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