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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183475061
OMEV01003181
293125
Verrucomicrobiota
GAA
Phe
>WENV183475219
OMEV01008427
406350
Verrucomicrobiota
TGT
Thr
>WENV183475273
OMEV01012458
148006
Verrucomicrobiota
CAA
Leu
>WENV183475293
OMEV01014170
101600
Verrucomicrobiota
AAG
Leu
>WENV183475108
OMEV01004214
405901
Verrucomicrobiota
GCC
Gly
>WENV183475335
OMEV01019160
483642
Verrucomicrobiota
CCC
Gly
>WENV183474944
OMEV01001574
229220
Verrucomicrobiota
CAT
Met
>WENV183475113
OMEV01004317
101463
Verrucomicrobiota
TAA
Leu
>WENV183475009
OMEV01002409
157427
Verrucomicrobiota
GTC
Asp
>WENV183475128
OMEV01005012
293079
Verrucomicrobiota
CGC
Ala
>WENV183475367
OMEV01025922
120352
Verrucomicrobiota
TAG
Leu
>WENV183475095
OMEV01004057
292636
Verrucomicrobiota
>WENV183475336
OMEV01019160
489412
Verrucomicrobiota
TCC
Gly
>WENV183475224
OMEV01008953
298263
Verrucomicrobiota
TTC
Glu
>WENV183475131
OMEV01005085
293069
Verrucomicrobiota
CTT
Lys
>WENV183475049
OMEV01002955
406336
Verrucomicrobiota
CCT
Arg
>WENV183475212
OMEV01007991
406369
Verrucomicrobiota
CCG
Arg
>WENV183475058
OMEV01003132
405940
Verrucomicrobiota
GGT
Thr
>WENV183475094
OMEV01004050
406044
Verrucomicrobiota
CTG
Gln
>WENV183475354
OMEV01023653
187556
Verrucomicrobiota
GGG
Pro
>WENV183475163
OMEV01006018
406037
Verrucomicrobiota
GTG
His
>WENV183475166
OMEV01006122
406360
Verrucomicrobiota
GAC
Val
>WENV183475181
OMEV01006443
187548
Verrucomicrobiota
TCT
Arg
>WENV183475130
OMEV01005085
406040
Verrucomicrobiota
CGT
Thr
>WENV183474964
OMEV01001788
57652
Verrucomicrobiota
TGA
Ser
>WENV183475159
OMEV01005831
406039
Verrucomicrobiota
CAC
Val
>WENV183474963
OMEV01001766
75458
Verrucomicrobiota
CAG
Leu
>WENV183475101
OMEV01004141
406368
Verrucomicrobiota
TTG
Gln
>WENV183475157
OMEV01005721
21159
Verrucomicrobiota
GGA
Ser
>WENV183475141
OMEV01005318
101461
Verrucomicrobiota
GTA
Tyr
>WENV183475173
OMEV01006186
293095
Verrucomicrobiota
TTT
Lys
>WENV183475065
OMEV01003222
187561
Verrucomicrobiota
CGG
Pro
>WENV183475030
OMEV01002688
406342
Verrucomicrobiota
CAT
Met
>WENV183475040
OMEV01002889
406351
Verrucomicrobiota
GTT
Asn
>WENV183475313
OMEV01015504
303305
Verrucomicrobiota
GGC
Ala
>WENV183475057
OMEV01003115
406346
Verrucomicrobiota
TAC
Val
>WENV183475151
OMEV01005560
8938
Verrucomicrobiota
GCT
Ser
>WENV183475062
OMEV01003181
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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