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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183482316
OMFM01000287
117741
Bacteroidota
TAG
Leu
>WENV183482422
OMFM01001024
175838
Bacteroidota
GTT
Asn
>WENV183482840
OMFM01041797
404226
Bacteroidota
CCT
Arg
>WENV183482246
OMFM01000091
400161
Bacteroidota
GGT
Thr
>WENV183482313
OMFM01000262
280557
Bacteroidota
CAT
Met
>WENV183482770
OMFM01024313
20206
Bacteroidota
GGA
Ser
>WENV183482779
OMFM01026302
398871
Bacteroidota
TTC
Glu
>WENV183482400
OMFM01000806
118221
Bacteroidota
CAA
Leu
>WENV183482337
OMFM01000417
175903
Bacteroidota
GTG
His
>WENV183482752
OMFM01021052
118089
Bacteroidota
TAG
Leu
>WENV183482594
OMFM01005172
175908
Bacteroidota
GTC
Asp
>WENV183482539
OMFM01003192
157895
Bacteroidota
TAC
Val
>WENV183482190
OMFM01000025
56385
Bacteroidota
TGA
Ser
>WENV183482632
OMFM01007564
57645
Bacteroidota
TGA
Ser
>WENV183482753
OMFM01021213
182267
Bacteroidota
GTT
Asn
>WENV183482272
OMFM01000154
242241
Bacteroidota
GTC
Asp
>WENV183482249
OMFM01000094
56072
Bacteroidota
TAA
Leu
>WENV183482513
OMFM01002726
175902
Bacteroidota
GGC
Ala
>WENV183482856
OMFM01045269
480404
Bacteroidota
TTG
Gln
>WENV183482458
OMFM01001523
280451
Bacteroidota
CGT
Thr
>WENV183482427
OMFM01001060
99847
Bacteroidota
GTA
Tyr
>WENV183482824
OMFM01037982
399200
Bacteroidota
CAT
Met
>WENV183482251
OMFM01000099
404109
Bacteroidota
CTC
Glu
>WENV183482384
OMFM01000663
46648
Bacteroidota
TAA
Leu
>WENV183482271
OMFM01000148
488746
Bacteroidota
CTG
Gln
>WENV183482494
OMFM01002300
187400
Bacteroidota
GTT
Asn
>WENV183482694
OMFM01013163
480318
Bacteroidota
CTG
Gln
>WENV183482280
OMFM01000178
178134
Bacteroidota
TGG
Pro
>WENV183482388
OMFM01000688
331443
Bacteroidota
CGT
Thr
>WENV183482639
OMFM01008064
398828
Bacteroidota
CCG
Arg
>WENV183482804
OMFM01031772
480325
Bacteroidota
CTG
Gln
>WENV183482402
OMFM01000812
140771
Bacteroidota
>WENV183482264
OMFM01000120
481328
Bacteroidota
TTG
Gln
>WENV183482572
OMFM01004515
69204
Bacteroidota
TGA
Ser
>WENV183482386
OMFM01000676
280446
Bacteroidota
TTT
Lys
>WENV183482348
OMFM01000482
280446
Bacteroidota
TTT
Lys
>WENV183482350
OMFM01000492
280446
Bacteroidota
TTT
Lys
>WENV183482290
OMFM01000199
484496
Bacteroidota
TTG
Gln
>WENV183482569
OMFM01004307
27502
Bacteroidota
GGA
Ser
>WENV183482769
OMFM01024109
285750
Bacteroidota
CCC
Gly
>WENV183482217
OMFM01000055
398836
Bacteroidota
GCA
Cys
>WENV183482606
OMFM01005968
170323
Bacteroidota
GGG
Pro
>WENV183482380
OMFM01000654
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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