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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183489580
OMGA01006488
99852
Bacillota
GTA
Tyr
>WENV183489634
OMGA01008363
280428
Bacillota
GAA
Phe
>WENV183489207
OMGA01000286
184114
Bacillota
GTG
His
>WENV183489754
OMGA01017140
280492
Bacillota
CTT
Lys
>WENV183489612
OMGA01007360
175842
Bacillota
CAC
Val
>WENV183489807
OMGA01022053
179563
Bacillota
GAT
Ile
>WENV183489477
OMGA01003455
406553
Bacillota
TTG
Gln
>WENV183489806
OMGA01022053
295166
Bacillota
TGC
Ala
>WENV183489644
OMGA01008907
295166
Bacillota
TGC
Ala
>WENV183489753
OMGA01017140
73664
Bacillota
CAG
Leu
>WENV183489379
OMGA01001613
280447
Bacillota
GAC
Val
>WENV183489750
OMGA01016847
5692
Bacillota
GCT
Ser
>WENV183489547
OMGA01005236
175825
Bacillota
GAT
Ile
>WENV183489743
OMGA01016069
284723
Bacillota
TAC
Val
>WENV183489545
OMGA01005164
73009
Bacillota
CAG
Leu
>WENV183489583
OMGA01006529
189473
Bacillota
GAT
Ile
>WENV183489775
OMGA01019113
175859
Bacillota
TCT
Arg
>WENV183489546
OMGA01005236
280436
Bacillota
TGC
Ala
>WENV183489327
OMGA01000919
21311
Bacillota
GCT
Ser
>WENV183489390
OMGA01001695
175831
Bacillota
ACG
Arg
>WENV183489703
OMGA01013148
179810
Bacillota
TCT
Arg
>WENV183489697
OMGA01012851
284627
Bacillota
GAA
Phe
>WENV183489685
OMGA01011577
484885
Bacillota
TCC
Gly
>WENV183489508
OMGA01004101
480322
Bacillota
CTG
Gln
>WENV183489633
OMGA01008320
175868
Bacillota
GTT
Asn
>WENV183489632
OMGA01008320
398854
Bacillota
CTC
Glu
>WENV183489579
OMGA01006389
291576
Bacillota
CCC
Gly
>WENV183489496
OMGA01003836
480324
Bacillota
TTG
Gln
>WENV183489458
OMGA01002979
303718
Bacillota
TGT
Thr
>WENV183489307
OMGA01000729
303718
Bacillota
TGT
Thr
>WENV183489216
OMGA01000305
303718
Bacillota
TGT
Thr
>WENV183489675
OMGA01010894
56079
Bacillota
AAG
Leu
>WENV183489581
OMGA01006514
186051
Bacillota
GAT
Ile
>WENV183489972
OMGA01060619
204381
Bacillota
GAT
Ile
>WENV183489334
OMGA01001034
280444
Bacillota
GGT
Thr
>WENV183489628
OMGA01008303
280444
Bacillota
GGT
Thr
>WENV183489849
OMGA01029680
179755
Bacillota
CCG
Arg
>WENV183489587
OMGA01006612
46835
Bacillota
TAA
Leu
>WENV183489122
OMGA01000050
398832
Bacillota
TTC
Glu
>WENV183489586
OMGA01006612
175915
Bacillota
GTC
Asp
>WENV183489387
OMGA01001681
280476
Bacillota
TTT
Lys
>WENV183489862
OMGA01032596
398852
Bacillota
CTC
Glu
>WENV183489729
OMGA01015714
285601
Bacillota
TTC
Glu
>WENV183489627
OMGA01008303
175849
Bacillota
GTC
Asp
>WENV183489384
OMGA01001681
179166
Bacillota
TCT
Arg
>WENV183489749
OMGA01016847
56074
Bacillota
TGA
Ser
>WENV183489572
OMGA01005993
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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