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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183492580
OMGI01000063
285360
Bacteroidota
TTT
Lys
>WENV183492641
OMGI01000162
117741
Bacteroidota
TAG
Leu
>WENV183493123
OMGI01007777
398829
Bacteroidota
CCT
Arg
>WENV183492873
OMGI01001313
404226
Bacteroidota
CCT
Arg
>WENV183492955
OMGI01002573
175904
Bacteroidota
CGG
Pro
>WENV183492792
OMGI01000766
289031
Bacteroidota
CAT
Met
>WENV183492549
OMGI01000035
289031
Bacteroidota
CAT
Met
>WENV183492763
OMGI01000633
280557
Bacteroidota
CAT
Met
>WENV183492718
OMGI01000402
280557
Bacteroidota
CAT
Met
>WENV183492607
OMGI01000095
280557
Bacteroidota
CAT
Met
>WENV183493168
OMGI01009820
20206
Bacteroidota
GGA
Ser
>WENV183492845
OMGI01001114
483416
Bacteroidota
CTG
Gln
>WENV183492691
OMGI01000312
483416
Bacteroidota
CTG
Gln
>WENV183493307
OMGI01029535
398871
Bacteroidota
TTC
Glu
>WENV183493118
OMGI01007584
56493
Bacteroidota
TGA
Ser
>WENV183493220
OMGI01014655
175906
Bacteroidota
GTG
His
>WENV183493031
OMGI01004196
175903
Bacteroidota
GTG
His
>WENV183492715
OMGI01000387
118089
Bacteroidota
TAG
Leu
>WENV183493117
OMGI01007532
280530
Bacteroidota
CCA
Trp
>WENV183493015
OMGI01003883
203954
Bacteroidota
GTC
Asp
>WENV183492741
OMGI01000500
203954
Bacteroidota
GTC
Asp
>WENV183493047
OMGI01004815
178907
Bacteroidota
TCT
Arg
>WENV183492708
OMGI01000376
405877
Bacteroidota
GGT
Thr
>WENV183493064
OMGI01005161
29791
Bacteroidota
GCT
Ser
>WENV183492876
OMGI01001395
182267
Bacteroidota
GTT
Asn
>WENV183492801
OMGI01000823
20449
Bacteroidota
GGA
Ser
>WENV183492683
OMGI01000274
56072
Bacteroidota
TAA
Leu
>WENV183492599
OMGI01000088
57807
Bacteroidota
TGA
Ser
>WENV183493101
OMGI01006654
175886
Bacteroidota
GGC
Ala
>WENV183493288
OMGI01025191
480404
Bacteroidota
TTG
Gln
>WENV183492957
OMGI01002623
280451
Bacteroidota
CGT
Thr
>WENV183492796
OMGI01000783
418894
Bacteroidota
TTC
Glu
>WENV183492554
OMGI01000037
99847
Bacteroidota
GTA
Tyr
>WENV183492838
OMGI01001062
399200
Bacteroidota
CAT
Met
>WENV183492932
OMGI01002263
186874
Bacteroidota
CAT
Met
>WENV183492850
OMGI01001159
186874
Bacteroidota
CAT
Met
>WENV183492900
OMGI01001744
178179
Bacteroidota
GGC
Ala
>WENV183492676
OMGI01000246
488746
Bacteroidota
CTG
Gln
>WENV183492761
OMGI01000606
20766
Bacteroidota
GGA
Ser
>WENV183493230
OMGI01016064
175844
Bacteroidota
GGC
Ala
>WENV183493185
OMGI01011073
73011
Bacteroidota
CAA
Leu
>WENV183493137
OMGI01008569
280515
Bacteroidota
CCA
Trp
>WENV183492934
OMGI01002286
183889
Bacteroidota
GGC
Ala
>WENV183493041
OMGI01004503
158068
Bacteroidota
GGG
Pro
>WENV183492833
OMGI01001002
158068
Bacteroidota
GGG
Pro
>WENV183492675
OMGI01000246
158068
Bacteroidota
GGG
Pro
>WENV183492809
OMGI01000872
398828
Bacteroidota
CCG
Arg
>WENV183492498
OMGI01000005
398828
Bacteroidota
CCG
Arg
>WENV183492972
OMGI01002847
74084
Bacteroidota
CAG
Leu
>WENV183493219
OMGI01014602
159415
Bacteroidota
TAC
Val
>WENV183493000
OMGI01003474
480325
Bacteroidota
CTG
Gln
>WENV183492611
OMGI01000098
176192
Bacteroidota
TCT
Arg
>WENV183492508
OMGI01000009
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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